RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 SF3A3Q12874 501 aaKnown RBP eCLIP11.69□□□□□ -0.54
CLIP1-203ENST00000361654 PI16Q6UXB8 463 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 EEF2KMTQ96G04 330 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 GBP5Q96PP8 586 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 TUBB6Q9BUF5 446 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 LSG1Q9H089 658 aaKnown RBP11.69□□□□□ -0.54
CLIP1-203ENST00000361654 INTS9Q9NV88 658 aaKnown RBP11.69□□□□□ -0.54
CLIP1-203ENST00000361654 CLCA2Q9UQC9 943 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 NCAPD2Q15021 1401 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 A0A0G2JLW4 131 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 KIAA0391O15091 583 aaKnown RBP11.69□□□□□ -0.54
CLIP1-203ENST00000361654 EFCAB14O75071 495 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 GRIK1P39086 918 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 STRIP1Q5VSL9 837 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 TRMT2AQ8IZ69 625 aaKnown RBP11.69□□□□□ -0.54
CLIP1-203ENST00000361654 MRFAP1L1Q96HT8 127 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 BAIAP2L1Q9UHR4 511 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 ROBO2Q9HCK4 1378 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 DCDC2CA8MYV0 355 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 GOLGA8MH3BSY2 632 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 ZBED6P86452 979 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 NAALADL2Q58DX5 795 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 ARMC6Q6NXE6 501 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 DCP1BQ8IZD4 617 aaKnown RBP11.69□□□□□ -0.54
CLIP1-203ENST00000361654 OTUB1Q96FW1 271 aaPredicted RBP11.69□□□□□ -0.54
CLIP1-203ENST00000361654 FAM217BQ9NTX9 383 aaPredicted RBP11.69□□□□□ -0.54
CLIP1-203ENST00000361654 SLC38A7Q9NVC3 462 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 SLC16A4O15374 487 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 PRDX5P30044 214 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 RCN2Q14257 317 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 LBRQ14739 615 aaKnown RBP11.69□□□□□ -0.54
CLIP1-203ENST00000361654 NKX1-1Q15270 411 aaPredicted RBP11.69□□□□□ -0.54
CLIP1-203ENST00000361654 TMED2Q15363 201 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 TAS2R42Q7RTR8 314 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 LRRC37BQ96QE4 947 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 STRBPQ96SI9 672 aaKnown RBP11.69□□□□□ -0.54
CLIP1-203ENST00000361654 UPF3AQ9H1J1 476 aaKnown RBP11.69□□□□□ -0.54
CLIP1-203ENST00000361654 SUDS3Q9H7L9 328 aaPredicted RBP11.69□□□□□ -0.54
CLIP1-203ENST00000361654 PYCARDQ9ULZ3 195 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 SH3BP1Q9Y3L3 701 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 HSD17B4P51659 736 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 PLTPP55058 493 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 PRAMEP78395 509 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 NFIXQ14938 502 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 TMEM132BQ14DG7 1078 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 VPS72Q15906 364 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 HLFQ16534 295 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 ZNF280CQ8ND82 737 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 GPRC5AQ8NFJ5 357 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 GDAP1L1Q96MZ0 367 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 SERPINI1Q99574 410 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 SUFUQ9UMX1 484 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 SMARCA1P28370 1054 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 TMEM270Q6UE05 265 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 NSUN7Q8NE18 718 aaKnown RBP11.68□□□□□ -0.54
CLIP1-203ENST00000361654 SARS2Q9NP81 518 aaKnown RBP11.68□□□□□ -0.54
CLIP1-203ENST00000361654 NDFIP2Q9NV92 336 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 OPHN1O60890 802 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 RPS6KA5O75582 802 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 ZFXP17010 805 aaPredicted RBP11.68□□□□□ -0.54
CLIP1-203ENST00000361654 ADORA2BP29275 332 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 ATICP31939 592 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 DPF3Q92784 378 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 KIF2CQ99661 725 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 KPNA7A9QM74 516 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 GNGT1P63211 74 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 NR1H3Q13133 447 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 NR5A1Q13285 461 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 DUOXA2Q1HG44 320 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 UNC13DQ70J99 1090 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 ANKRD13AQ8IZ07 590 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 RMDN1Q96DB5 314 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 DYDC2Q96IM9 177 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 NDST4Q9H3R1 872 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 DIS3Q9Y2L1 958 aaKnown RBP11.68□□□□□ -0.54
CLIP1-203ENST00000361654 DNMT1P26358 1616 aaKnown RBP11.68□□□□□ -0.54
CLIP1-203ENST00000361654 EXOC1LA0A1B0GW35 172 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 KRT38O76015 456 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 CHRNA5P30532 468 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 ENOSF1Q7L5Y1 443 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 CELF1Q92879 486 aaKnown RBP11.68□□□□□ -0.54
CLIP1-203ENST00000361654 YIPF2Q9BWQ6 316 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 JPH1Q9HDC5 661 aaPredicted RBP11.68□□□□□ -0.54
CLIP1-203ENST00000361654 PCDHGB4Q9UN71 923 aa11.68□□□□□ -0.54
CLIP1-203ENST00000361654 RGS12O14924 1447 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 ARL4CP56559 192 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 MTMR2Q13614 643 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 STILQ15468 1287 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 KIF19Q2TAC6 998 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 ASAP3Q8TDY4 903 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 SLC26A7Q8TE54 656 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 MTA3Q9BTC8 594 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 THEGQ9P2T0 379 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 ZRANB2O95218 330 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLIP1-203ENST00000361654 HSPA4LO95757 839 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 KRT7P08729 469 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 HADHAP40939 763 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 CUL1Q13616 776 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 FAM117BQ6P1L5 589 aa11.67□□□□□ -0.54
CLIP1-203ENST00000361654 NCLNQ969V3 563 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms