RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TTC30AQ86WT1 665 aa19.92■□□□□ 0.78
CLIP2-202ENST00000361545 TBK1Q9UHD2 729 aa19.92■□□□□ 0.78
CLIP2-202ENST00000361545 SLCO1A2P46721 670 aa19.92■□□□□ 0.78
CLIP2-202ENST00000361545 DHX9Q08211 1270 aaKnown RBP19.92■□□□□ 0.78
CLIP2-202ENST00000361545 MAP7Q14244 749 aa19.92■□□□□ 0.78
CLIP2-202ENST00000361545 ARID5BQ14865 1188 aa19.92■□□□□ 0.78
CLIP2-202ENST00000361545 TSGA10IPQ3SY00 556 aa19.92■□□□□ 0.78
CLIP2-202ENST00000361545 ZNF746Q6NUN9 644 aaPredicted RBP19.92■□□□□ 0.78
CLIP2-202ENST00000361545 AFG1LQ8WV93 481 aa19.92■□□□□ 0.78
CLIP2-202ENST00000361545 TMEM143Q96AN5 459 aa19.92■□□□□ 0.78
CLIP2-202ENST00000361545 TTC1Q99614 292 aa19.92■□□□□ 0.78
CLIP2-202ENST00000361545 HEMGNQ9BXL5 484 aa19.92■□□□□ 0.78
CLIP2-202ENST00000361545 NOC2LQ9Y3T9 749 aaKnown RBP19.92■□□□□ 0.78
CLIP2-202ENST00000361545 CLGNO14967 610 aa19.92■□□□□ 0.78
CLIP2-202ENST00000361545 ZNF449Q6P9G9 518 aa19.92■□□□□ 0.78
CLIP2-202ENST00000361545 ZNF512BQ96KM6 892 aaPredicted RBP19.92■□□□□ 0.78
CLIP2-202ENST00000361545 KDM6AO15550 1401 aaPredicted RBP19.91■□□□□ 0.78
CLIP2-202ENST00000361545 SPDYE2BA6NHP3 402 aa19.91■□□□□ 0.78
CLIP2-202ENST00000361545 SPDYE6P0CI01 402 aa19.91■□□□□ 0.78
CLIP2-202ENST00000361545 ZFYVE28Q9HCC9 887 aa19.91■□□□□ 0.78
CLIP2-202ENST00000361545 PDE11AQ9HCR9 933 aa19.91■□□□□ 0.78
CLIP2-202ENST00000361545 A8MXQ7 604 aa19.91■□□□□ 0.78
CLIP2-202ENST00000361545 FGGP02679 453 aa19.91■□□□□ 0.78
CLIP2-202ENST00000361545 PDHBP11177 359 aa19.91■□□□□ 0.78
CLIP2-202ENST00000361545 GYS1P13807 737 aa19.91■□□□□ 0.78
CLIP2-202ENST00000361545 HSPA6P17066 643 aa19.91■□□□□ 0.78
CLIP2-202ENST00000361545 ARHGAP25P42331 645 aa19.91■□□□□ 0.78
CLIP2-202ENST00000361545 KRT39Q6A163 491 aa19.91■□□□□ 0.78
CLIP2-202ENST00000361545 GPD1LQ8N335 351 aa19.91■□□□□ 0.78
CLIP2-202ENST00000361545 SUCLA2Q9P2R7 463 aaPredicted RBP19.91■□□□□ 0.78
CLIP2-202ENST00000361545 EYA4O95677 639 aa19.91■□□□□ 0.78
CLIP2-202ENST00000361545 CHMP6Q96FZ7 201 aa19.91■□□□□ 0.78
CLIP2-202ENST00000361545 INTS2Q9H0H0 1204 aaKnown RBP19.91■□□□□ 0.78
CLIP2-202ENST00000361545 RAB44Q7Z6P3 723 aaPredicted RBP19.91■□□□□ 0.78
CLIP2-202ENST00000361545 VCX3BQ9H321 246 aa19.91■□□□□ 0.78
CLIP2-202ENST00000361545 DR1Q01658 176 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 IQCB1Q15051 598 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 SH2D4BQ5SQS7 431 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 TOGARAM2Q6ZUX3 1019 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 TLK1Q9UKI8 766 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 TXNDC9O14530 226 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 CPB1P15086 417 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 SSTR3P32745 418 aaPredicted RBP19.9■□□□□ 0.78
CLIP2-202ENST00000361545 ASPHQ12797 758 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 JADE1Q6IE81 842 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 CAPS2Q9BXY5 557 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 DPYSL4O14531 572 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 SEC31AO94979 1220 aaKnown RBP19.9■□□□□ 0.78
CLIP2-202ENST00000361545 SLC7A5Q01650 507 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 GFPT1Q06210 699 aaPredicted RBP19.9■□□□□ 0.78
CLIP2-202ENST00000361545 NAALADL2Q58DX5 795 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 RNF219Q5W0B1 726 aaPredicted RBP19.9■□□□□ 0.78
CLIP2-202ENST00000361545 PCGF5Q86SE9 256 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 HPS3Q969F9 1004 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 PPP1R12CQ9BZL4 782 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 GNA15P30679 374 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 MRPS25P82663 173 aaKnown RBP19.9■□□□□ 0.78
CLIP2-202ENST00000361545 PCSK1NQ9UHG2 260 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 HEY1Q9Y5J3 304 aa19.9■□□□□ 0.78
CLIP2-202ENST00000361545 PRKCBP05771 671 aa19.89■□□□□ 0.78
CLIP2-202ENST00000361545 RASSF2P50749 326 aa19.89■□□□□ 0.78
CLIP2-202ENST00000361545 DRAP1Q14919 205 aaPredicted RBP19.89■□□□□ 0.78
CLIP2-202ENST00000361545 PIDD1Q9HB75 910 aa19.89■□□□□ 0.78
CLIP2-202ENST00000361545 FIS1Q9Y3D6 152 aa19.89■□□□□ 0.78
CLIP2-202ENST00000361545 RPS12P25398 132 aaKnown RBP19.89■□□□□ 0.77
CLIP2-202ENST00000361545 PMLP29590 882 aa19.89■□□□□ 0.77
CLIP2-202ENST00000361545 RFX5P48382 616 aaPredicted RBP19.89■□□□□ 0.77
CLIP2-202ENST00000361545 TMEM62Q0P6H9 643 aa19.89■□□□□ 0.77
CLIP2-202ENST00000361545 TMEM106CQ9BVX2 250 aa19.89■□□□□ 0.77
CLIP2-202ENST00000361545 EMSYQ7Z589 1322 aa19.89■□□□□ 0.77
CLIP2-202ENST00000361545 CREB3O43889 395 aa19.89■□□□□ 0.77
CLIP2-202ENST00000361545 EPHB4P54760 987 aa19.89■□□□□ 0.77
CLIP2-202ENST00000361545 GUF1Q8N442 669 aaKnown RBP19.89■□□□□ 0.77
CLIP2-202ENST00000361545 ALDH8A1Q9H2A2 487 aaPredicted RBP19.89■□□□□ 0.77
CLIP2-202ENST00000361545 PALMO75781 387 aa19.89■□□□□ 0.77
CLIP2-202ENST00000361545 TBXAS1P24557 533 aaPredicted RBP19.89■□□□□ 0.77
CLIP2-202ENST00000361545 PDCD6IPQ8WUM4 868 aaKnown RBP19.89■□□□□ 0.77
CLIP2-202ENST00000361545 ZKSCAN4Q969J2 545 aaPredicted RBP19.89■□□□□ 0.77
CLIP2-202ENST00000361545 AGBL1Q96MI9 1066 aa19.89■□□□□ 0.77
CLIP2-202ENST00000361545 SENP2Q9HC62 589 aa19.89■□□□□ 0.77
CLIP2-202ENST00000361545 TUFT1Q9NNX1 390 aa19.89■□□□□ 0.77
CLIP2-202ENST00000361545 INTS9Q9NV88 658 aaKnown RBP19.89■□□□□ 0.77
CLIP2-202ENST00000361545 RNF14Q9UBS8 474 aa19.89■□□□□ 0.77
CLIP2-202ENST00000361545 GPR75-ASB3A0A0A6YYF3 556 aa19.89■□□□□ 0.77
CLIP2-202ENST00000361545 SLC10A5Q5PT55 438 aa19.89■□□□□ 0.77
CLIP2-202ENST00000361545 RSRC1Q96IZ7 334 aaKnown RBP19.89■□□□□ 0.77
CLIP2-202ENST00000361545 GPC5P78333 572 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 ATG4CQ96DT6 458 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 NCAPGQ9BPX3 1015 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 PHF20Q9BVI0 1012 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 ABHD10Q9NUJ1 306 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 ASNSD1Q9NWL6 643 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 MOCS2O96007 188 aaPredicted RBP19.88■□□□□ 0.77
CLIP2-202ENST00000361545 SDC4P31431 198 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 SLC12A1Q13621 1099 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 XKR3Q5GH77 459 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 BZW1Q7L1Q6 419 aaKnown RBP19.88■□□□□ 0.77
CLIP2-202ENST00000361545 CCHCR1Q8TD31 782 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 NUDCD1Q96RS6 583 aa19.88■□□□□ 0.77
CLIP2-202ENST00000361545 POLLQ9UGP5 575 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms