RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 ELMO3Q96BJ8 720 aa15.16■□□□□ 0.02
PCMTD1-201ENST00000360540 ELAC2Q9BQ52 826 aaKnown RBP15.16■□□□□ 0.02
PCMTD1-201ENST00000360540 NUP85Q9BW27 656 aa15.16■□□□□ 0.02
PCMTD1-201ENST00000360540 CELF4Q9BZC1 486 aaKnown RBP15.16■□□□□ 0.02
PCMTD1-201ENST00000360540 NWD1Q149M9 1564 aa15.16■□□□□ 0.02
PCMTD1-201ENST00000360540 CAPN9O14815 690 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 CYP11B2P19099 503 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 PSMC6P62333 389 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 CDKAL1Q5VV42 579 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 FAM47EQ6ZV65 393 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 DPP9Q86TI2 863 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 SREK1Q8WXA9 508 aaKnown RBP15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 NGRNQ9NPE2 291 aaKnown RBP15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 PCSK1NQ9UHG2 260 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 DMGDHQ9UI17 866 aaKnown RBP15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 KCNG1Q9UIX4 513 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 CNTNAP4Q9C0A0 1308 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 PSMC4P43686 418 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 NT5C2P49902 561 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 TRIM65Q6PJ69 517 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 TRIM66O15016 1216 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 CLDN3O15551 220 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 RPSAP08865 295 aaKnown RBP15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 CNGA1P29973 690 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 SLC27A3Q5K4L6 730 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 SLC10A5Q5PT55 438 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 FAM160B1Q5W0V3 765 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 RHOT2Q8IXI1 618 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 DDX4Q9NQI0 724 aaKnown RBP15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 INTS13Q9NVM9 706 aa15.15■□□□□ 0.02
PCMTD1-201ENST00000360540 FRMD3A2A2Y4 597 aa15.14■□□□□ 0.02
PCMTD1-201ENST00000360540 CCDC188H7C350 402 aa15.14■□□□□ 0.02
PCMTD1-201ENST00000360540 PDXKO00764 312 aa15.14■□□□□ 0.02
PCMTD1-201ENST00000360540 KCNJ1P48048 391 aa15.14■□□□□ 0.02
PCMTD1-201ENST00000360540 NUGGCQ68CJ6 796 aa15.14■□□□□ 0.02
PCMTD1-201ENST00000360540 BARGINQ6ZT62 677 aa15.14■□□□□ 0.02
PCMTD1-201ENST00000360540 CCDC197Q8NCU1 140 aa15.14■□□□□ 0.02
PCMTD1-201ENST00000360540 ZNF564Q8TBZ8 553 aaPredicted RBP15.14■□□□□ 0.02
PCMTD1-201ENST00000360540 RNPC3Q96LT9 517 aaKnown RBP15.14■□□□□ 0.02
PCMTD1-201ENST00000360540 PIM2Q9P1W9 311 aa15.14■□□□□ 0.02
PCMTD1-201ENST00000360540 ZRANB2O95218 330 aaKnown RBP eCLIP15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 P4HA1P13674 534 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 SOX5P35711 763 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 IRX4P78413 519 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 NEDD9Q14511 834 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 SYCP2LQ5T4T6 812 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 OR6B2Q6IFH4 312 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 CCNI2Q6ZMN8 369 aaPredicted RBP15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 ZFPM1Q8IX07 1006 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 TMEM143Q96AN5 459 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 RUSC1Q9BVN2 902 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 RPAP3Q9H6T3 665 aaPredicted RBP15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 GPRC5CQ9NQ84 441 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 FEM1BQ9UK73 627 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 PLAGL2Q9UPG8 496 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 PI4K2BG5E9Z4 385 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 FBXL16Q8N461 479 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 RUNDC3BQ96NL0 473 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.14■□□□□ 0.015e-11■■■□□ 16.3
PCMTD1-201ENST00000360540 MED10Q9BTT4 135 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 PI4K2AQ9BTU6 479 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 F5H423 210 aaPredicted RBP15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 ABL1P00519 1130 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 SARSP49591 514 aaKnown RBP15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 PSMD6Q15008 389 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 HIBCHQ6NVY1 386 aaPredicted RBP15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 KCNK18Q7Z418 384 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 KIAA0895Q8NCT3 520 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 NYAP2Q9P242 653 aa15.14■□□□□ 0.01
PCMTD1-201ENST00000360540 FOXP2O15409 715 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 MSH4O15457 936 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 YWHABP31946 246 aaKnown RBP15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 CLNS1AP54105 237 aaKnown RBP15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 FRMD5Q7Z6J6 570 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 SLC35G2Q8TBE7 412 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 CDHR1Q96JP9 859 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 EXOC1LA0A1B0GW35 172 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 FMO5P49326 533 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 EPHA7Q15375 998 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 SUPT20HL1Q3ZLR7 823 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 PPP6R3Q5H9R7 873 aaPredicted RBP15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 ZNF772Q68DY9 489 aaPredicted RBP15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 TRIM68Q6AZZ1 485 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 CDR2LQ86X02 465 aaPredicted RBP15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 SRRM1Q8IYB3 904 aaKnown RBP15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 ARHGAP20Q9P2F6 1191 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 GGT7Q9UJ14 662 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 PIK3R2O00459 728 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 RPA1P27694 616 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 FXR2P51116 673 aaKnown RBP eCLIP15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 LRRC8CQ8TDW0 803 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 NLRP7Q8WX94 980 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 HSPH1Q92598 858 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 RSRC1Q96IZ7 334 aaKnown RBP15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 TAF1DQ9H5J8 278 aaPredicted RBP15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 TBC1D22BQ9NU19 505 aa15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 HERC5Q9UII4 1024 aaKnown RBP15.13■□□□□ 0.01
PCMTD1-201ENST00000360540 PSMD14O00487 310 aa15.12■□□□□ 0.01
PCMTD1-201ENST00000360540 YWHAEP62258 255 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms