RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 C9orf50Q5SZB4 431 aa7.12□□□□□ -1.27
SUDS3-201ENST00000360286 CHRDL2Q6WN34 429 aa7.12□□□□□ -1.27
SUDS3-201ENST00000360286 SV2BQ7L1I2 683 aa7.12□□□□□ -1.27
SUDS3-201ENST00000360286 OTOP2Q7RTS6 562 aa7.12□□□□□ -1.27
SUDS3-201ENST00000360286 DYMQ7RTS9 669 aa7.12□□□□□ -1.27
SUDS3-201ENST00000360286 RTN4RL1Q86UN2 441 aaPredicted RBP7.12□□□□□ -1.27
SUDS3-201ENST00000360286 GPBP1Q86WP2 473 aa7.12□□□□□ -1.27
SUDS3-201ENST00000360286 DAW1Q8N136 415 aa7.12□□□□□ -1.27
SUDS3-201ENST00000360286 FSIP1Q8NA03 581 aa7.12□□□□□ -1.27
SUDS3-201ENST00000360286 RNF149Q8NC42 400 aa7.12□□□□□ -1.27
SUDS3-201ENST00000360286 MCPH1Q8NEM0 835 aa7.12□□□□□ -1.27
SUDS3-201ENST00000360286 PSPC1Q8WXF1 523 aaKnown RBP7.12□□□□□ -1.27
SUDS3-201ENST00000360286 LARP4BQ92615 738 aaKnown RBP7.12□□□□□ -1.27
SUDS3-201ENST00000360286 NLRP4Q96MN2 994 aa7.12□□□□□ -1.27
SUDS3-201ENST00000360286 GCOM2Q9BZD3 368 aaPredicted RBP7.12□□□□□ -1.27
SUDS3-201ENST00000360286 UBE2OQ9C0C9 1292 aaKnown RBP7.12□□□□□ -1.27
SUDS3-201ENST00000360286 MINDY3Q9H8M7 445 aa7.12□□□□□ -1.27
SUDS3-201ENST00000360286 STK17AQ9UEE5 414 aa7.12□□□□□ -1.27
SUDS3-201ENST00000360286 HPSEQ9Y251 543 aa7.12□□□□□ -1.27
SUDS3-201ENST00000360286 COL4A3BPQ9Y5P4 624 aa7.12□□□□□ -1.27
SUDS3-201ENST00000360286 TANC1Q9C0D5 1861 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 FAM237AA0A1B0GTK4 181 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 GOLGA6L4A6NEF3 574 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 GAS2O43903 313 aaKnown RBP7.11□□□□□ -1.27
SUDS3-201ENST00000360286 MGEA5O60502 916 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 RPS6KA5O75582 802 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 PARNO95453 639 aaKnown RBP7.11□□□□□ -1.27
SUDS3-201ENST00000360286 RPLP2P05387 115 aaKnown RBP7.11□□□□□ -1.27
SUDS3-201ENST00000360286 DARSP14868 501 aaKnown RBP7.11□□□□□ -1.27
SUDS3-201ENST00000360286 GUCY2CP25092 1073 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 BMP8BP34820 402 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 SYKP43405 635 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 AFMP43652 599 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 PEX3P56589 373 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 CDC42EP1Q00587 391 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 NFX1Q12986 1120 aaKnown RBP7.11□□□□□ -1.27
SUDS3-201ENST00000360286 MAPK7Q13164 816 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 MXD4Q14582 209 aaPredicted RBP7.11□□□□□ -1.27
SUDS3-201ENST00000360286 PLEKHG4Q58EX7 1191 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.11□□□□□ -1.27
SUDS3-201ENST00000360286 TSHZ1Q6ZSZ6 1077 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 FAM228AQ86W67 206 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 GRAMD1CQ8IYS0 662 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 IQUBQ8NA54 791 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 MRPS27Q92552 414 aaKnown RBP7.11□□□□□ -1.27
SUDS3-201ENST00000360286 DDX12PQ92771 950 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 DNAJC19Q96DA6 116 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 SCLT1Q96NL6 688 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 REEP2Q9BRK0 252 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 KIFC3Q9BVG8 833 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 BLZF1Q9H2G9 400 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 PRO3102Q9H379 93 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 TMX1Q9H3N1 280 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 ZHX3Q9H4I2 956 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 IFT122Q9HBG6 1241 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 ERVK-5Q9HDB9 667 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 KBTBD4Q9NVX7 518 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 PADI3Q9ULW8 664 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 ST3GAL5Q9UNP4 418 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 COLQQ9Y215 455 aaPredicted RBP7.11□□□□□ -1.27
SUDS3-201ENST00000360286 USP20Q9Y2K6 914 aa7.11□□□□□ -1.27
SUDS3-201ENST00000360286 LRRIQ4A6NIV6 560 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 CCDC169A6NNP5 214 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 ENPP3O14638 875 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 GPR182O15218 404 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 ACTN4O43707 911 aaKnown RBP7.1□□□□□ -1.27
SUDS3-201ENST00000360286 ZNF202O95125 648 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 KRT18P05783 430 aaKnown RBP7.1□□□□□ -1.27
SUDS3-201ENST00000360286 LIG1P18858 919 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 EIF4BP23588 611 aaKnown RBP7.1□□□□□ -1.27
SUDS3-201ENST00000360286 NAMPTP43490 491 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 NPTX2P47972 431 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 PTENP60484 403 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 PAK2Q13177 524 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 SNW1Q13573 536 aaKnown RBP7.1□□□□□ -1.27
SUDS3-201ENST00000360286 TFDP1Q14186 410 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 CNKSR3Q6P9H4 555 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 CLEC17AQ6ZS10 378 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 SRGAP1Q7Z6B7 1085 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 TMCO2Q7Z6W1 182 aaPredicted RBP7.1□□□□□ -1.27
SUDS3-201ENST00000360286 ZNF410Q86VK4 478 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 CEP57L1Q8IYX8 460 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 FMR1NBQ8N0W7 255 aaPredicted RBP7.1□□□□□ -1.27
SUDS3-201ENST00000360286 MYCT1Q8N699 235 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 USP38Q8NB14 1042 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 TMEM87AQ8NBN3 555 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 ENGASEQ8NFI3 743 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 HERVK_113Q902F9 699 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 SEPT8Q92599 483 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 KIFAP3Q92845 792 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 PAGE5Q96GU1 130 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 IFT74Q96LB3 600 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 C7orf25Q9BPX7 421 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 IFIH1Q9BYX4 1025 aaKnown RBP7.1□□□□□ -1.27
SUDS3-201ENST00000360286 CUEDC2Q9H467 287 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 KCND2Q9NZV8 630 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 CXXC1Q9P0U4 656 aaPredicted RBP7.1□□□□□ -1.27
SUDS3-201ENST00000360286 SQORQ9Y6N5 450 aa7.1□□□□□ -1.27
SUDS3-201ENST00000360286 ADGRA3Q8IWK6 1321 aa7.09□□□□□ -1.27
SUDS3-201ENST00000360286 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms