RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 CDC42EP1Q00587 391 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 CAPSQ13938 189 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 TRIM71Q2Q1W2 868 aaKnown RBP16.85■□□□□ 0.29
TPM1-206ENST00000358278 ODR4Q5SWX8 454 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 ELOA2Q8IYF1 753 aaPredicted RBP16.85■□□□□ 0.29
TPM1-206ENST00000358278 C7orf61Q8IZ16 206 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 ZNF710Q8N1W2 664 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 RNF149Q8NC42 400 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 CCDC47Q96A33 483 aaKnown RBP16.85■□□□□ 0.29
TPM1-206ENST00000358278 PPP1R12CQ9BZL4 782 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 CLSTN2Q9H4D0 955 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 PRKAG2Q9UGJ0 569 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 TBX21Q9UL17 535 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 CDY2AQ9Y6F7 541 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 TET1Q8NFU7 2136 aa16.85■□□□□ 0.29
TPM1-206ENST00000358278 CCDC169A6NNP5 214 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 PITPNM1O00562 1244 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 EVI5O60447 810 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 GAP43P17677 238 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 ZNF131P52739 623 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 MDM2Q00987 491 aaPredicted RBP16.84■□□□□ 0.29
TPM1-206ENST00000358278 DPYDQ12882 1025 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 ZNF618Q5T7W0 954 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 UNC13DQ70J99 1090 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 ZNF410Q86VK4 478 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 BSNDQ8WZ55 320 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 NOC4LQ9BVI4 516 aaKnown RBP16.84■□□□□ 0.29
TPM1-206ENST00000358278 TRPV2Q9Y5S1 764 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 SMC2O95347 1197 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 NAMPTP43490 491 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 SMTNP53814 917 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 RBL2Q08999 1139 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 COASYQ13057 564 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 HERC4Q5GLZ8 1057 aaPredicted RBP16.84■□□□□ 0.29
TPM1-206ENST00000358278 PDE4DIPQ5VU43 2346 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 LRRC8DQ7L1W4 858 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 SFR1Q86XK3 245 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 FAM178BQ8IXR5 827 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 DEPTORQ8TB45 409 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 DPF3Q92784 378 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 ERCC4Q92889 916 aaPredicted RBP16.84■□□□□ 0.29
TPM1-206ENST00000358278 OSMRQ99650 979 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 CELF4Q9BZC1 486 aaKnown RBP16.84■□□□□ 0.29
TPM1-206ENST00000358278 KMT5AQ9NQR1 393 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 EXOC1Q9NV70 894 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 SEL1LQ9UBV2 794 aa16.84■□□□□ 0.29
TPM1-206ENST00000358278 A0A087WZ62 844 aa16.83■□□□□ 0.28
TPM1-206ENST00000358278 PVALEFA0A1B0GWK0 134 aa16.83■□□□□ 0.28
TPM1-206ENST00000358278 FRMD3A2A2Y4 597 aa16.83■□□□□ 0.28
TPM1-206ENST00000358278 GPR32O75388 356 aa16.83■□□□□ 0.28
TPM1-206ENST00000358278 RPN1P04843 607 aaKnown RBP16.83■□□□□ 0.28
TPM1-206ENST00000358278 SELPP16109 830 aa16.83■□□□□ 0.28
TPM1-206ENST00000358278 PHKA2P46019 1235 aa16.83■□□□□ 0.28
TPM1-206ENST00000358278 NPTX2P47972 431 aa16.83■□□□□ 0.28
TPM1-206ENST00000358278 KLHL40Q2TBA0 621 aa16.83■□□□□ 0.28
TPM1-206ENST00000358278 SMARCE1Q969G3 411 aa16.83■□□□□ 0.28
TPM1-206ENST00000358278 SYAP1Q96A49 352 aaPredicted RBP16.83■□□□□ 0.28
TPM1-206ENST00000358278 FDXACB1Q9BRP7 624 aaPredicted RBP16.83■□□□□ 0.28
TPM1-206ENST00000358278 KCNG1Q9UIX4 513 aa16.83■□□□□ 0.28
TPM1-206ENST00000358278 K7ENM7 598 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 TRAK2O60296 914 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 CHRNA1P02708 482 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 RAG1P15918 1043 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 CRYBB1P53674 252 aaPredicted RBP16.82■□□□□ 0.28
TPM1-206ENST00000358278 MGAT3Q09327 533 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 SKOR2Q2VWA4 1001 aaPredicted RBP16.82■□□□□ 0.28
TPM1-206ENST00000358278 ZBTB8OSQ8IWT0 167 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 KIFC3Q9BVG8 833 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 GCOM2Q9BZD3 368 aaPredicted RBP16.82■□□□□ 0.28
TPM1-206ENST00000358278 C2orf40Q9H1Z8 148 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 ADAMTS10Q9H324 1103 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 MRPL44Q9H9J2 332 aaKnown RBP16.82■□□□□ 0.28
TPM1-206ENST00000358278 TBC1D7Q9P0N9 293 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 UMODL1Q5DID0 1318 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 KIAA0355O15063 1070 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 SLC16A4O15374 487 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 CAPN15O75808 1086 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 CYP2C18P33260 490 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 KMT5BQ4FZB7 885 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 FAM26DQ5JW98 314 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 CCDC183Q5T5S1 534 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 CAVIN1Q6NZI2 390 aaKnown RBP16.82■□□□□ 0.28
TPM1-206ENST00000358278 SPIRE2Q8WWL2 714 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 IFT122Q9HBG6 1241 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 OLFML3Q9NRN5 406 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 PCDHA5Q9Y5H7 936 aa16.82■□□□□ 0.28
TPM1-206ENST00000358278 TRIM43BA6NCK2 446 aa16.81■□□□□ 0.28
TPM1-206ENST00000358278 KLRC4O43908 158 aa16.81■□□□□ 0.28
TPM1-206ENST00000358278 EIF4BP23588 611 aaKnown RBP16.81■□□□□ 0.28
TPM1-206ENST00000358278 CCL23P55773 120 aa16.81■□□□□ 0.28
TPM1-206ENST00000358278 PTENP60484 403 aa16.81■□□□□ 0.28
TPM1-206ENST00000358278 FAM26FQ5R3K3 315 aa16.81■□□□□ 0.28
TPM1-206ENST00000358278 SLC17A8Q8NDX2 589 aa16.81■□□□□ 0.28
TPM1-206ENST00000358278 TRIM43Q96BQ3 446 aaPredicted RBP16.81■□□□□ 0.28
TPM1-206ENST00000358278 GSDMAQ96QA5 445 aa16.81■□□□□ 0.28
TPM1-206ENST00000358278 INO80BQ9C086 356 aaPredicted RBP16.81■□□□□ 0.28
TPM1-206ENST00000358278 CDHR5Q9HBB8 845 aa16.81■□□□□ 0.28
TPM1-206ENST00000358278 RMND1Q9NWS8 449 aa16.81■□□□□ 0.28
TPM1-206ENST00000358278 ADGRA3Q8IWK6 1321 aa16.81■□□□□ 0.28
TPM1-206ENST00000358278 MICAL3Q7RTP6 2002 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms