RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 LCP1P13796 627 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 RFX8Q6ZV50 586 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 MRFAP1L1Q96HT8 127 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 MAGED4Q96JG8 741 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 LZTS2Q9BRK4 669 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 TRIM54Q9BYV2 358 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 ARMCX3Q9UH62 379 aaPredicted RBP10.4□□□□□ -0.74
CHD3-202ENST00000358181 PNMA3Q9UL41 463 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 ATP11BQ9Y2G3 1177 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 MROH5Q6ZUA9 1318 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 SLFN14P0C7P3 912 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 AKAP5P24588 427 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 ADD1P35611 737 aaKnown RBP10.4□□□□□ -0.74
CHD3-202ENST00000358181 PCYT1AP49585 367 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 SCNN1BP51168 640 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 NOL9Q5SY16 702 aaKnown RBP10.4□□□□□ -0.74
CHD3-202ENST00000358181 SLC25A24Q6NUK1 477 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 TMEM154Q6P9G4 183 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 KIAA2013Q8IYS2 634 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 RIN3Q8TB24 985 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 SEPT5Q99719 369 aaPredicted RBP10.4□□□□□ -0.74
CHD3-202ENST00000358181 VPS11Q9H270 941 aa10.4□□□□□ -0.74
CHD3-202ENST00000358181 LRRD1A4D1F6 860 aa10.4□□□□□ -0.75
CHD3-202ENST00000358181 PSDA5PKW4 1024 aaPredicted RBP10.4□□□□□ -0.75
CHD3-202ENST00000358181 ACADMP11310 421 aa10.4□□□□□ -0.75
CHD3-202ENST00000358181 PI16Q6UXB8 463 aa10.4□□□□□ -0.75
CHD3-202ENST00000358181 TTC8Q8TAM2 541 aa10.4□□□□□ -0.75
CHD3-202ENST00000358181 IGFLR1Q9H665 355 aa10.4□□□□□ -0.75
CHD3-202ENST00000358181 ENTPD7Q9NQZ7 604 aa10.4□□□□□ -0.75
CHD3-202ENST00000358181 PALD1Q9ULE6 856 aa10.4□□□□□ -0.75
CHD3-202ENST00000358181 LZTS3O60299 673 aaPredicted RBP10.39□□□□□ -0.75
CHD3-202ENST00000358181 CTSHP09668 335 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 GRK2P25098 689 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 LRRC41Q15345 812 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 SGO1Q5FBB7 561 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 MTIF3Q9H2K0 278 aaKnown RBP10.39□□□□□ -0.75
CHD3-202ENST00000358181 TSKSQ9UJT2 592 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 SNX6Q9UNH7 406 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 IQCA1LA6NCM1 817 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 ERVK-10P10266 1014 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 GFAPP14136 432 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 PLCL1Q15111 1095 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 TRIM71Q2Q1W2 868 aaKnown RBP10.39□□□□□ -0.75
CHD3-202ENST00000358181 SLFNL1Q499Z3 407 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 BTNL9Q6UXG8 535 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 MAGOHBQ96A72 148 aaKnown RBP10.39□□□□□ -0.75
CHD3-202ENST00000358181 TMEM87BQ96K49 555 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 TBX22Q9Y458 520 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 ADGRA2Q96PE1 1338 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 TCEA2Q15560 299 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 NUP93Q8N1F7 819 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 CBX8Q9HC52 389 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 APPL1Q9UKG1 709 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 ZFYVE9O95405 1425 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 SOS2Q07890 1332 aaPredicted RBP10.39□□□□□ -0.75
CHD3-202ENST00000358181 IPO5O00410 1097 aaKnown RBP10.39□□□□□ -0.75
CHD3-202ENST00000358181 KRT4P19013 534 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 E2F5Q15329 346 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 SYCP2LQ5T4T6 812 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 ICE2Q659A1 982 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 TSSK1BQ9BXA7 367 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 NDOR1Q9UHB4 597 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 ADAM21Q9UKJ8 722 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 CYP7B1O75881 506 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 ARF5P84085 180 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 RAD51Q06609 339 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 CUL4AQ13619 759 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 TRIP4Q15650 581 aaPredicted RBP10.39□□□□□ -0.75
CHD3-202ENST00000358181 UXS1Q8NBZ7 420 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 THTPAQ9BU02 230 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 MOV10L1Q9BXT6 1211 aaKnown RBP10.39□□□□□ -0.75
CHD3-202ENST00000358181 ADNPQ9H2P0 1102 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 STN1Q9H668 368 aaKnown RBP10.39□□□□□ -0.75
CHD3-202ENST00000358181 CCDC78A2IDD5 438 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 CHL1O00533 1208 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 MLNP12872 115 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 RPS7P62081 194 aaKnown RBP10.39□□□□□ -0.75
CHD3-202ENST00000358181 LRRC8EQ6NSJ5 796 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 UNC45BQ8IWX7 931 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 MARCH10Q8NA82 808 aaPredicted RBP10.39□□□□□ -0.75
CHD3-202ENST00000358181 SNX21Q969T3 373 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 FOPNLQ96NB1 174 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 ACCSQ96QU6 501 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 TJP2Q9UDY2 1190 aa10.39□□□□□ -0.75
CHD3-202ENST00000358181 EDC4Q6P2E9 1401 aaKnown RBP10.39□□□□□ -0.75
CHD3-202ENST00000358181 CYP2D7A0A087X1C5 515 aa10.38□□□□□ -0.75
CHD3-202ENST00000358181 ZBTB7AO95365 584 aa10.38□□□□□ -0.75
CHD3-202ENST00000358181 CA4P22748 312 aa10.38□□□□□ -0.75
CHD3-202ENST00000358181 ADCK1Q86TW2 530 aa10.38□□□□□ -0.75
CHD3-202ENST00000358181 ANKRD13CQ8N6S4 541 aa10.38□□□□□ -0.75
CHD3-202ENST00000358181 SERPINI1Q99574 410 aa10.38□□□□□ -0.75
CHD3-202ENST00000358181 SH3BP1Q9Y3L3 701 aa10.38□□□□□ -0.75
CHD3-202ENST00000358181 HOXA13P31271 388 aaPredicted RBP10.38□□□□□ -0.75
CHD3-202ENST00000358181 RASGRF1Q13972 1273 aa10.38□□□□□ -0.75
CHD3-202ENST00000358181 IYDQ6PHW0 289 aa10.38□□□□□ -0.75
CHD3-202ENST00000358181 IFNL3Q8IZI9 196 aa10.38□□□□□ -0.75
CHD3-202ENST00000358181 DESI2Q9BSY9 194 aa10.38□□□□□ -0.75
CHD3-202ENST00000358181 SENP2Q9HC62 589 aa10.38□□□□□ -0.75
CHD3-202ENST00000358181 IKBKBO14920 756 aa10.38□□□□□ -0.75
CHD3-202ENST00000358181 PSAPP07602 524 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms