RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 CENPCQ03188 943 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 FBXW10Q5XX13 1052 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 UPF3AQ9H1J1 476 aaKnown RBP4.4□□□□□ -1.71
SYNE2-204ENST00000358025 C17orf75Q9HAS0 396 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 PENKP01210 267 aaPredicted RBP4.4□□□□□ -1.71
SYNE2-204ENST00000358025 TFAP4Q01664 338 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 SPATS1Q496A3 300 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 SLC44A4Q53GD3 710 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 GALNT15Q8N3T1 639 aa4.4□□□□□ -1.71
SYNE2-204ENST00000358025 UNC5CO95185 931 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 PLCG1P19174 1290 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 MAGEA8P43361 318 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 KIAA1755Q5JYT7 1200 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 PYROXD1Q8WU10 500 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 STRIP2Q9ULQ0 834 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 ARHGAP26Q9UNA1 814 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 MYH8P13535 1937 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 SNX3O60493 162 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 LDHBP07195 334 aaKnown RBP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 FXR1P51114 621 aaKnown RBP eCLIP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 DMP1Q13316 513 aaPredicted RBP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 BLMHQ13867 455 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 LETM2Q2VYF4 491 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 CHURC1Q8WUH1 139 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 FAM124BQ9H5Z6 455 aaPredicted RBP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 CBFA2T3O75081 653 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 E2F6O75461 281 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 PRKCIP41743 596 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 CDK18Q07002 472 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 R3HDM1Q15032 1099 aaKnown RBP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 EAPPQ56P03 285 aaPredicted RBP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 RAPGEF5Q92565 580 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 PNMA6FA0A0J9YX94 578 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 KRT14P02533 472 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 MAPTP10636 758 aaKnown RBP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 IL2RBP14784 551 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 PCYT1AP49585 367 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 CDK16Q00536 496 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 AP1B1Q10567 949 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 CCDC153Q494R4 210 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 NELFCDQ8IXH7 590 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 IRGQQ8WZA9 623 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 DDX56Q9NY93 547 aaKnown RBP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 RTN2O75298 545 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 KCTD16Q68DU8 428 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 TRIM68Q6AZZ1 485 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 CCNJLQ8IV13 435 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 ZNF507Q8TCN5 953 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 SOX5P35711 763 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 CWF19L1Q69YN2 538 aaKnown RBP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 MINDY2Q8NBR6 621 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 ABCC3O15438 1527 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 CCDC162PA2VCL2 907 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 PDLIM1O00151 329 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 PTPN4P29074 926 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 MED21Q13503 144 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 KRT80Q6KB66 452 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 ZNF280CQ8ND82 737 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 CD2APQ9Y5K6 639 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 ATP6V1G2O95670 118 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 PDXDC1Q6P996 788 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 ZIM3Q96PE6 472 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 LRWD1Q9UFC0 647 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 HECW2Q9P2P5 1572 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 MGRN1O60291 552 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 MOCS3O95396 460 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 ADCY7P51828 1080 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 DRAXINQ8NBI3 349 aaPredicted RBP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 LRRC39Q96DD0 335 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 BTBD9Q96Q07 612 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 EPC1Q9H2F5 836 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 NAGPAQ9UK23 515 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 CSDE1O75534 798 aaKnown RBP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 HNRNPCP07910 306 aaKnown RBP eCLIP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 SERPINB10P48595 397 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 TUBA4AP68366 448 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 ELF3P78545 371 aaPredicted RBP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 PCNX4Q63HM2 1172 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 TRMT1LQ7Z2T5 733 aaKnown RBP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 DLG3Q92796 817 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 KCNK16Q96T55 309 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 PHF20Q9BVI0 1012 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 HPS5Q9UPZ3 1129 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 LARGE1O95461 756 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 ART3Q13508 389 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 KYAT1Q16773 422 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 CCT6BQ92526 530 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 CNKSR1Q969H4 720 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 CCDC124Q96CT7 223 aaKnown RBP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 ZNF518BQ9C0D4 1074 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 C5orf60A6NFR6 353 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 AP5Z1O43299 807 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 MORF4L2Q15014 288 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 AASDHQ4L235 1098 aaPredicted RBP4.39□□□□□ -1.71
SYNE2-204ENST00000358025 GPBP1Q86WP2 473 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 SCFD2Q8WU76 684 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 PRDM11Q9NQV5 511 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 WDR37Q9Y2I8 494 aa4.39□□□□□ -1.71
SYNE2-204ENST00000358025 PSMC4P43686 418 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms