RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 DDX25Q9UHL0 483 aaKnown RBP11.5□□□□□ -0.57
LINC01560-201ENST00000357412 KCNJ14Q9UNX9 436 aa11.5□□□□□ -0.57
LINC01560-201ENST00000357412 MUC6Q6W4X9 2439 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 A0A087WZ62 844 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 FSD2A1L4K1 749 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 DDX11L8A8MPP1 907 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 EML1O00423 815 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 MAFO75444 373 aaPredicted RBP11.49□□□□□ -0.57
LINC01560-201ENST00000357412 PPM1AP35813 382 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 PSMC5P62195 406 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 SYCE2Q6PIF2 218 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 CPLX2Q6PUV4 134 aaKnown RBP11.49□□□□□ -0.57
LINC01560-201ENST00000357412 KRT25Q7Z3Z0 450 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 SLC39A11Q8N1S5 342 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 HELQQ8TDG4 1101 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 EDAQ92838 391 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 FDXACB1Q9BRP7 624 aaPredicted RBP11.49□□□□□ -0.57
LINC01560-201ENST00000357412 PHF20Q9BVI0 1012 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 KCNMB3Q9NPA1 279 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 DACT1Q9NYF0 836 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 SPG21Q9NZD8 308 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 SUCLA2Q9P2R7 463 aaPredicted RBP11.49□□□□□ -0.57
LINC01560-201ENST00000357412 VAV3Q9UKW4 847 aa11.49□□□□□ -0.57
LINC01560-201ENST00000357412 MYH6P13533 1939 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 TECP42680 631 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 PHKA2P46019 1235 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 KRT17Q04695 432 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 PPP2R5CQ13362 524 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 LETM2Q2VYF4 491 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 PLA2G4FQ68DD2 849 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 PPP4R3AQ6IN85 833 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 ANKRD54Q6NXT1 300 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 TMC7Q7Z402 723 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 ZNF410Q86VK4 478 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 KSR1Q8IVT5 923 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 MRPL43Q8N983 215 aaKnown RBP11.48□□□□□ -0.57
LINC01560-201ENST00000357412 HAS1Q92839 578 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 RPGRIP1Q96KN7 1286 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 ENTPD7Q9NQZ7 604 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 GJB4Q9NTQ9 266 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 WRAP73Q9P2S5 460 aaPredicted RBP11.48□□□□□ -0.57
LINC01560-201ENST00000357412 TPCN1Q9ULQ1 816 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 SIP14410 1827 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 MYH7BA7E2Y1 1941 aa11.48□□□□□ -0.57
LINC01560-201ENST00000357412 C2orf71A6NGG8 1288 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 MEIS3P2A8K0S8 358 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 NT5C1B-RDH14C9J2C7 533 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 DTNBO60941 627 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 CTDNEP1O95476 244 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 SFPQP23246 707 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC01560-201ENST00000357412 QARSP47897 775 aaKnown RBP11.47□□□□□ -0.57
LINC01560-201ENST00000357412 DNM2P50570 870 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 NPEPPSP55786 919 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 BCAR1P56945 870 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 EARS2Q5JPH6 523 aaKnown RBP11.47□□□□□ -0.57
LINC01560-201ENST00000357412 LLGL2Q6P1M3 1020 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 TRIM67Q6ZTA4 783 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 NEK8Q86SG6 692 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 TMEM173Q86WV6 379 aaPredicted RBP11.47□□□□□ -0.57
LINC01560-201ENST00000357412 RHPN2Q8IUC4 686 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 ZNF579Q8NAF0 562 aaKnown RBP11.47□□□□□ -0.57
LINC01560-201ENST00000357412 OXER1Q8TDS5 423 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 MFSD14AQ96MC6 490 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 FBXL18Q96ME1 805 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 FAM20AQ96MK3 541 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 NLRP4Q96MN2 994 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 MRPL9Q9BYD2 267 aaKnown RBP11.47□□□□□ -0.57
LINC01560-201ENST00000357412 INO80BQ9C086 356 aaPredicted RBP11.47□□□□□ -0.57
LINC01560-201ENST00000357412 CYP26B1Q9NR63 512 aa11.47□□□□□ -0.57
LINC01560-201ENST00000357412 STK36Q9NRP7 1315 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 CCDC194A0A1B0GVG4 234 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 PFKFB2O60825 505 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 ZNF623O75123 536 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 OFD1O75665 1012 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 CDKL5O76039 1030 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 P4HBP07237 508 aaKnown RBP11.46□□□□□ -0.57
LINC01560-201ENST00000357412 SRGAP2BP0DMP2 458 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 GCFC2P16383 781 aaKnown RBP11.46□□□□□ -0.57
LINC01560-201ENST00000357412 HOXB8P17481 243 aaPredicted RBP11.46□□□□□ -0.57
LINC01560-201ENST00000357412 ALDH7A1P49419 539 aaKnown RBP11.46□□□□□ -0.57
LINC01560-201ENST00000357412 ZXDAP98168 799 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 LONRF3Q496Y0 759 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 TWF2Q6IBS0 349 aaKnown RBP11.46□□□□□ -0.57
LINC01560-201ENST00000357412 PIK3AP1Q6ZUJ8 805 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 BMP8AQ7Z5Y6 402 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 RSPH1Q8WYR4 309 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 LPPQ93052 612 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 JPH2Q9BR39 696 aaPredicted RBP11.46□□□□□ -0.57
LINC01560-201ENST00000357412 APOL5Q9BWW9 433 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 KCNH6Q9H252 994 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 SLKQ9H2G2 1235 aaPredicted RBP11.46□□□□□ -0.57
LINC01560-201ENST00000357412 DHX33Q9H6R0 707 aaKnown RBP11.46□□□□□ -0.57
LINC01560-201ENST00000357412 IFT122Q9HBG6 1241 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 FAM105AQ9NUU6 356 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 PIN4Q9Y237 131 aaKnown RBP11.46□□□□□ -0.57
LINC01560-201ENST00000357412 HCFC2Q9Y5Z7 792 aa11.46□□□□□ -0.57
LINC01560-201ENST00000357412 TMEM221A6NGB7 291 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 M0R296 226 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 TBX3O15119 743 aa11.45□□□□□ -0.58
LINC01560-201ENST00000357412 CCNT1O60563 726 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms