RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 KIF11P52732 1056 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 SETQ01105 290 aaPredicted RBP13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 SPIRE1Q08AE8 756 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 ITGB3BPQ13352 177 aaPredicted RBP13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 FAM110CQ1W6H9 321 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 ASTE1Q2TB18 679 aaPredicted RBP13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 FKBP15Q5T1M5 1219 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 GPR142Q7Z601 462 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 IQCKQ8N0W5 287 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 CDK5RAP3Q96JB5 506 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 FAM20AQ96MK3 541 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 NCAPGQ9BPX3 1015 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 MLXIPQ9HAP2 919 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 MORF4L1Q9UBU8 362 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 VAV3Q9UKW4 847 aa13.84□□□□□ -0.19
RTFDC1-202ENST00000357348 POTEB3A0JP26 581 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 SRRM3A6NNA2 597 aaPredicted RBP13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 TBX3O15119 743 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 HSF2BPO75031 334 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 MOCS3O95396 460 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 PLEKP08567 350 aaPredicted RBP13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 MTIF2P46199 727 aaKnown RBP13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 INHBEP58166 350 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 PDE4DQ08499 809 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 PDIA5Q14554 519 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 CENPPQ6IPU0 288 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 POTEBQ6S5H4 581 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 KDM7AQ6ZMT4 941 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 B4GALNT4Q76KP1 1039 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 OTOP1Q7RTM1 612 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 DNERQ8NFT8 737 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 SLC5A5Q92911 643 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 CCDC47Q96A33 483 aaKnown RBP13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 CALML4Q96GE6 196 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 ALS2CR12Q96Q35 445 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 EDEM3Q9BZQ6 932 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 AGO4Q9HCK5 861 aaKnown RBP13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 RGL1Q9NZL6 768 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 BRCA2P51587 3418 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 TLR2O60603 784 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 MED24O75448 989 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 PSMD10O75832 226 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 HNRNPH1P31943 449 aaKnown RBP13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 FNTAP49354 379 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 LIG3P49916 1009 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 STK4Q13043 487 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 GRB10Q13322 594 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 STXBP2Q15833 593 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 KCNV1Q6PIU1 500 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 YTHDF3Q7Z739 585 aaKnown RBP13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 RNF10Q8N5U6 811 aaKnown RBP13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 FGD4Q96M96 766 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 ZIM3Q96PE6 472 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 PNMA5Q96PV4 448 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 TLR10Q9BXR5 811 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 UNC45AQ9H3U1 944 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 CREBZFQ9NS37 354 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 TSKSQ9UJT2 592 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 TELO2Q9Y4R8 837 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 SAMM50Q9Y512 469 aa13.83□□□□□ -0.2
RTFDC1-202ENST00000357348 RBAK-RBAKDNI3L0D1 243 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 FSBPO95073 299 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 COPB2P35606 906 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 GSCP56915 257 aaPredicted RBP13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 CTTNQ14247 550 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 VWA3BQ502W6 1294 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 NFRKBQ6P4R8 1299 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 FOXR2Q6PJQ5 311 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 KCNK18Q7Z418 384 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 DPP9Q86TI2 863 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 SHCBP1Q8NEM2 672 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 DRC1Q96MC2 740 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 TEKT3Q9BXF9 490 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 ZFYVE28Q9HCC9 887 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 KIAA1024Q9UPX6 916 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 DNAJC25-GNG10A0A024R161 153 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 SSU72P8A0A1W2PR75 194 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 POTEFA5A3E0 1075 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 NKRFO15226 690 aaKnown RBP eCLIP13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 BCRP11274 1271 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 EIF4A3P38919 411 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 PAFAH1B1P43034 410 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 KLHDC7AQ5VTJ3 777 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 POTEGQ6S5H5 508 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 CATSPER3Q86XQ3 398 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 BAP1Q92560 729 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 HHIPL1Q96JK4 782 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 INPP4AQ96PE3 977 aaPredicted RBP13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 SEMA6BQ9H3T3 888 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 GGA2Q9UJY4 613 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 ZSWIM8A7E2V4 1837 aa13.82□□□□□ -0.2
RTFDC1-202ENST00000357348 E9PMD0 336 aa13.81□□□□□ -0.2
RTFDC1-202ENST00000357348 EPHB6O15197 1021 aa13.81□□□□□ -0.2
RTFDC1-202ENST00000357348 DHX15O43143 795 aaKnown RBP13.81□□□□□ -0.2
RTFDC1-202ENST00000357348 SSBP05455 408 aaKnown RBP eCLIP13.81□□□□□ -0.2
RTFDC1-202ENST00000357348 TM4SF4P48230 202 aa13.81□□□□□ -0.2
RTFDC1-202ENST00000357348 SP2Q02086 613 aa13.81□□□□□ -0.2
RTFDC1-202ENST00000357348 NOGQ13253 232 aa13.81□□□□□ -0.2
RTFDC1-202ENST00000357348 C17orf99Q6UX52 265 aa13.81□□□□□ -0.2
RTFDC1-202ENST00000357348 NLRX1Q86UT6 975 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms