RNA–Protein interactions for RNA: ENST00000357194.10

UBE2D3-206, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-206ENST00000357194 VPS52Q8N1B4 723 aa11.54□□□□□ -0.56
UBE2D3-206ENST00000357194 C12orf76Q8N812 135 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-206ENST00000357194 TMEM87AQ8NBN3 555 aa11.54□□□□□ -0.56
UBE2D3-206ENST00000357194 CCDC12Q8WUD4 166 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-206ENST00000357194 NLRP7Q8WX94 980 aa11.54□□□□□ -0.56
UBE2D3-206ENST00000357194 TMEM169Q96HH4 297 aa11.54□□□□□ -0.56
UBE2D3-206ENST00000357194 MRPL9Q9BYD2 267 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-206ENST00000357194 SMOC2Q9H3U7 446 aa11.54□□□□□ -0.56
UBE2D3-206ENST00000357194 DACT1Q9NYF0 836 aa11.54□□□□□ -0.56
UBE2D3-206ENST00000357194 CCDC196A0A1B0GTZ2 297 aa11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 ZC3H11AO75152 810 aaKnown RBP eCLIP11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 ASGR2P07307 311 aa11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 FGD1P98174 961 aa11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 PRKCEQ02156 737 aa11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 TBC1D8BQ0IIM8 1120 aa11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 UGCGQ16739 394 aa11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 ATAT1Q5SQI0 421 aa11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 KANK3Q6NY19 840 aa11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 ZDHHC14Q8IZN3 488 aa11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 TMEM105Q8N8V8 129 aa11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 AUTS2Q8WXX7 1259 aa11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 LENG9Q96B70 501 aa11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 ZBP1Q9H171 429 aa11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 CHST12Q9NRB3 414 aa11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 LIMD1Q9UGP4 676 aa11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 DBR1Q9UK59 544 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-206ENST00000357194 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 MSH4O15457 936 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 PRPF3O43395 683 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 CHMP2AO43633 222 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 EDIL3O43854 480 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 GAS7O60861 476 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 CTSAP10619 480 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 EPCAMP16422 314 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 SFNP31947 248 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 PHKA2P46019 1235 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 CDC42EP1Q00587 391 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 DRP2Q13474 957 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 GIT2Q14161 759 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 KRT32Q14532 448 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 LONRF3Q496Y0 759 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 KIAA1841Q6NSI8 718 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 ASCL5Q7RTU5 278 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 DDX53Q86TM3 631 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 TMEM173Q86WV6 379 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 PLCD3Q8N3E9 789 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 TDRD5Q8NAT2 981 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 BICD2Q8TD16 824 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 LPPQ93052 612 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 CCDC136Q96JN2 1154 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 GCOM2Q9BZD3 368 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 DZANK1Q9NVP4 752 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 USTQ9Y2C2 406 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 IRAK3Q9Y616 596 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 SPTBN4Q9H254 2564 aa11.52□□□□□ -0.57
UBE2D3-206ENST00000357194 VPS13AQ96RL7 3174 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 A0A087WZ62 844 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 HMGB1P09429 215 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 CPA1P15085 419 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 NBL1P41271 181 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 DNM2P50570 870 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 USP11P51784 963 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 JAK3P52333 1124 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 POLGP54098 1239 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 AKAP17AQ02040 695 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 TARBP2Q15633 366 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 MTERF2Q49AM1 385 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 LRCH2Q5VUJ6 765 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 TWF2Q6IBS0 349 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 Q6ZUG5 572 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 SLC22A17Q8WUG5 538 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 SLC5A5Q92911 643 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 PHKBQ93100 1093 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 GJA10Q969M2 543 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 IGSF21Q96ID5 467 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 RIT2Q99578 217 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 SH2D3AQ9BRG2 576 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 FDXACB1Q9BRP7 624 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 TRAIPQ9BWF2 469 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 UNC45AQ9H3U1 944 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 MFSD1Q9H3U5 465 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 NRDE2Q9H7Z3 1164 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 TBC1D13Q9NVG8 400 aa11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 SEPT9Q9UHD8 586 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-206ENST00000357194 WDR87Q6ZQQ6 2873 aa11.5□□□□□ -0.57
UBE2D3-206ENST00000357194 CARNS1A5YM72 827 aa11.5□□□□□ -0.57
UBE2D3-206ENST00000357194 TMEM150BA6NC51 233 aa11.5□□□□□ -0.57
UBE2D3-206ENST00000357194 PRR23AA6NEV1 266 aa11.5□□□□□ -0.57
UBE2D3-206ENST00000357194 MEIS3P2A8K0S8 358 aa11.5□□□□□ -0.57
UBE2D3-206ENST00000357194 GALTP07902 379 aa11.5□□□□□ -0.57
UBE2D3-206ENST00000357194 SKIP12755 728 aa11.5□□□□□ -0.57
UBE2D3-206ENST00000357194 SFPQP23246 707 aaKnown RBP eCLIP11.5□□□□□ -0.573e-6■□□□□ 10.5
UBE2D3-206ENST00000357194 CLCN5P51795 746 aa11.5□□□□□ -0.57
UBE2D3-206ENST00000357194 RNASELQ05823 741 aaKnown RBP11.5□□□□□ -0.57
UBE2D3-206ENST00000357194 BMP2KLQ5H9B9 411 aa11.5□□□□□ -0.57
UBE2D3-206ENST00000357194 NOMO2Q5JPE7 1267 aa11.5□□□□□ -0.57
UBE2D3-206ENST00000357194 GLB1LQ6UWU2 654 aa11.5□□□□□ -0.57
UBE2D3-206ENST00000357194 TMC5Q6UXY8 1006 aa11.5□□□□□ -0.57
UBE2D3-206ENST00000357194 MIER3Q7Z3K6 550 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms