RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 EEF1DP29692 281 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 ADORA1P30542 326 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 ATP1A2P50993 1020 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 KCNA1Q09470 495 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 SNCBQ16143 134 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 BBS9Q3SYG4 887 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 SWT1Q5T5J6 900 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 FAM173BQ6P4H8 233 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 SCYL3Q8IZE3 742 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 LCORLQ8N3X6 602 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 UHMK1Q8TAS1 419 aaKnown RBP5.91□□□□□ -1.46
PTPRD-202ENST00000356435 SLC26A7Q8TE54 656 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 COPRSQ9NQ92 184 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 EMILIN3Q9NT22 766 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 MYO5CQ9NQX4 1742 aa5.91□□□□□ -1.46
PTPRD-202ENST00000356435 DNAJC6O75061 913 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 KRT38O76015 456 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 ZRANB2O95218 330 aaKnown RBP eCLIP5.9□□□□□ -1.46
PTPRD-202ENST00000356435 SDC4P31431 198 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 CASP14P31944 242 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 CRKP46108 304 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 MECOMQ03112 1051 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 ZNF235Q14590 738 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 PPP6R3Q5H9R7 873 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-202ENST00000356435 THEMIS2Q5TEJ8 643 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 KCNV1Q6PIU1 500 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 ACAD9Q9H845 621 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 OVOS2A0A0G2JMS6 1433 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 OVOS2A0A0J9YW53 1432 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 OVOS2Q6IE36 1432 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 CFAP69A5D8W1 941 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 C21orf2O43822 256 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 SYF2O95926 243 aaKnown RBP5.9□□□□□ -1.46
PTPRD-202ENST00000356435 PDIA3P30101 505 aaKnown RBP5.9□□□□□ -1.46
PTPRD-202ENST00000356435 ATICP31939 592 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 DYNLL1P63167 89 aaKnown RBP5.9□□□□□ -1.46
PTPRD-202ENST00000356435 KRT80Q6KB66 452 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 CDKL3Q8IVW4 592 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-202ENST00000356435 MB21D1Q8N884 522 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 MAML1Q92585 1016 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 ASPSCR1Q9BZE9 553 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 POLR3FQ9H1D9 316 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-202ENST00000356435 TRPC7Q9HCX4 862 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 CYP26B1Q9NR63 512 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 POLR3EQ9NVU0 708 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 CAPN7Q9Y6W3 813 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 GRIN3BO60391 1043 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 RWDD2BP57060 319 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 CDC42EP1Q00587 391 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 FKBP3Q00688 224 aaKnown RBP5.9□□□□□ -1.46
PTPRD-202ENST00000356435 ACAD11Q709F0 780 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 RHOT2Q8IXI1 618 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 RMDN3Q96TC7 470 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 SUDS3Q9H7L9 328 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-202ENST00000356435 GINM1Q9NU53 330 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 RNF14Q9UBS8 474 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 ADAM21Q9UKJ8 722 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 PPP1R12AO14974 1030 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-202ENST00000356435 CLDN3O15551 220 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 MYBL1P10243 752 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 NCF2P19878 526 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-202ENST00000356435 LRRC63Q05C16 580 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 KSR1Q8IVT5 923 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 PGBD3Q8N328 593 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 TTC13Q8NBP0 860 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 EHD2Q9NZN4 543 aa5.9□□□□□ -1.46
PTPRD-202ENST00000356435 EPN1Q9Y6I3 576 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-202ENST00000356435 UBE4BO95155 1302 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 SPDYE5A6NIY4 337 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 ZBTB5O15062 677 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 E2F6O75461 281 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 SERPING1P05155 500 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 MCF2P10911 925 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 CDK8P49336 464 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 AP3M2P53677 418 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 EIF2B5Q13144 721 aaKnown RBP5.9□□□□□ -1.47
PTPRD-202ENST00000356435 LRRC41Q15345 812 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 SPDYE7PQ495Y7 208 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 TEDDM1Q5T9Z0 273 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 BTBD8Q5XKL5 378 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 FAM129AQ9BZQ8 928 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 ARHGAP10A1A4S6 786 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 SH2B2O14492 632 aaPredicted RBP5.9□□□□□ -1.47
PTPRD-202ENST00000356435 ZNF197O14709 1029 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 ARIH2O95376 493 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 MMP1P03956 469 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 SMARCA1P28370 1054 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 ADORA2BP29275 332 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 ADD1P35611 737 aaKnown RBP5.9□□□□□ -1.47
PTPRD-202ENST00000356435 CAPZA2P47755 286 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 TFDP2Q14188 446 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 FLOT2Q14254 428 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 UBE2SQ16763 222 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 NAF1Q96HR8 494 aaKnown RBP5.9□□□□□ -1.47
PTPRD-202ENST00000356435 FOPNLQ96NB1 174 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 HECW2Q9P2P5 1572 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 E9PMD0 336 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 PLTPP55058 493 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 CCDC15Q0P6D6 951 aa5.9□□□□□ -1.47
PTPRD-202ENST00000356435 CCDC144BQ3MJ40 725 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms