RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 GCFC2P16383 781 aaKnown RBP10.96□□□□□ -0.65
PTPRA-203ENST00000356147 HOXA13P31271 388 aaPredicted RBP10.96□□□□□ -0.65
PTPRA-203ENST00000356147 VPS41P49754 854 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 ZNF543Q08ER8 600 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 TRIP13Q15645 432 aaPredicted RBP10.96□□□□□ -0.65
PTPRA-203ENST00000356147 EDRF1Q3B7T1 1238 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 C10orf76Q5T2E6 689 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 BARGINQ6ZT62 677 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 FRMD5Q7Z6J6 570 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 SYCE1Q8N0S2 351 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.96□□□□□ -0.651e-6■■■■■ 44.1
PTPRA-203ENST00000356147 PWWP2AQ96N64 755 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 KCNK9Q9NPC2 374 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 TBK1Q9UHD2 729 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 PCDHA1Q9Y5I3 950 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 BZW2Q9Y6E2 419 aaKnown RBP10.96□□□□□ -0.65
PTPRA-203ENST00000356147 KDM3AQ9Y4C1 1321 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 RREB1Q92766 1687 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 ROBO1Q9Y6N7 1651 aa10.96□□□□□ -0.65
PTPRA-203ENST00000356147 BTNL10A8MVZ5 291 aa10.96□□□□□ -0.66
PTPRA-203ENST00000356147 BHMG1C9JSJ3 638 aaPredicted RBP10.96□□□□□ -0.66
PTPRA-203ENST00000356147 UBAP1LF5GYI3 381 aa10.96□□□□□ -0.66
PTPRA-203ENST00000356147 DIAPH2O60879 1101 aa10.96□□□□□ -0.66
PTPRA-203ENST00000356147 GH1P01241 217 aa10.96□□□□□ -0.66
PTPRA-203ENST00000356147 PEX19P40855 299 aa10.96□□□□□ -0.66
PTPRA-203ENST00000356147 PRKCIP41743 596 aa10.96□□□□□ -0.66
PTPRA-203ENST00000356147 ALDH5A1P51649 535 aaPredicted RBP10.96□□□□□ -0.66
PTPRA-203ENST00000356147 JAM2P57087 298 aa10.96□□□□□ -0.66
PTPRA-203ENST00000356147 SNX1Q13596 522 aa10.96□□□□□ -0.66
PTPRA-203ENST00000356147 CTTNQ14247 550 aaKnown RBP10.96□□□□□ -0.66
PTPRA-203ENST00000356147 SAMD1Q6SPF0 538 aaPredicted RBP10.96□□□□□ -0.66
PTPRA-203ENST00000356147 OLIG1Q8TAK6 271 aa10.96□□□□□ -0.66
PTPRA-203ENST00000356147 ANO3Q9BYT9 981 aa10.96□□□□□ -0.66
PTPRA-203ENST00000356147 TXLNGYQ9BZA5 131 aa10.96□□□□□ -0.66
PTPRA-203ENST00000356147 CTTNBP2NLQ9P2B4 639 aa10.96□□□□□ -0.66
PTPRA-203ENST00000356147 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.96□□□□□ -0.66
PTPRA-203ENST00000356147 DNM3Q9UQ16 869 aa10.96□□□□□ -0.66
PTPRA-203ENST00000356147 ALG6Q9Y672 507 aa10.96□□□□□ -0.66
PTPRA-203ENST00000356147 DOT1LQ8TEK3 1739 aa10.96□□□□□ -0.66
PTPRA-203ENST00000356147 GOLGA6L10A0A0M3HER8 536 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 RIMBP2O15034 1052 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 DNAJC8O75937 253 aaPredicted RBP10.95□□□□□ -0.66
PTPRA-203ENST00000356147 SPATA31C1P0DKV0 1188 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 TNFAIP3P21580 790 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 MMP13P45452 471 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 TPTE2Q6XPS3 522 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 PHLDB2Q86SQ0 1253 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 FAM186BQ8IYM0 893 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 PRELID2Q8N945 189 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 RFFLQ8WZ73 363 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 CNOT10Q9H9A5 744 aaKnown RBP10.95□□□□□ -0.66
PTPRA-203ENST00000356147 CD209Q9NNX6 404 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 DDX4Q9NQI0 724 aaKnown RBP10.95□□□□□ -0.66
PTPRA-203ENST00000356147 GRHL1Q9NZI5 618 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 COL22A1Q8NFW1 1626 aaPredicted RBP10.95□□□□□ -0.66
PTPRA-203ENST00000356147 SRRM3A6NNA2 597 aaPredicted RBP10.95□□□□□ -0.66
PTPRA-203ENST00000356147 IGF2BP3O00425 579 aaKnown RBP eCLIP10.95□□□□□ -0.66
PTPRA-203ENST00000356147 SOX5P35711 763 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 CLK2P49760 499 aaKnown RBP10.95□□□□□ -0.66
PTPRA-203ENST00000356147 SCNN1DP51172 638 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 CACNB3P54284 484 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 UBXN2AP68543 259 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 GPSM2P81274 684 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 MAPK7Q13164 816 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 SEPT2Q15019 361 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 QRICH1Q2TAL8 776 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 ASPRV1Q53RT3 343 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 NUGGCQ68CJ6 796 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 TLDC1Q6P9B6 456 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 NSMFQ6X4W1 530 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 ARHGAP27Q6ZUM4 889 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 ADAM33Q9BZ11 813 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 ECT2Q9H8V3 914 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 TRPC6Q9Y210 931 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 IRS2Q9Y4H2 1338 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 CCDC169A6NNP5 214 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 TISP43B9A030 160 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 FAM86B1E9PN63 330 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 FOXN3O00409 490 aaPredicted RBP10.95□□□□□ -0.66
PTPRA-203ENST00000356147 TGFB1I1O43294 461 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 CALUO43852 315 aaPredicted RBP10.95□□□□□ -0.66
PTPRA-203ENST00000356147 TBCAO75347 108 aaKnown RBP10.95□□□□□ -0.66
PTPRA-203ENST00000356147 FAM86B2P0C5J1 330 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 MYBL1P10243 752 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 MMP14P50281 582 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 SLC10A5Q5PT55 438 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 NAIF1Q69YI7 327 aaPredicted RBP10.95□□□□□ -0.66
PTPRA-203ENST00000356147 ZNF804AQ7Z570 1209 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 PIGWQ7Z7B1 504 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 CCDC105Q8IYK2 499 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 MYCT1Q8N699 235 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 EIF1ADQ8N9N8 165 aaKnown RBP10.95□□□□□ -0.66
PTPRA-203ENST00000356147 SEC14L1Q92503 715 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 FAXDC2Q96IV6 333 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 FAM118BQ9BPY3 351 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 FAM167BQ9BTA0 163 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 TRAF3IP3Q9Y228 551 aa10.95□□□□□ -0.66
PTPRA-203ENST00000356147 GPR75-ASB3A0A0A6YYF3 556 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 EML1O00423 815 aa10.94□□□□□ -0.66
PTPRA-203ENST00000356147 RASGRF2O14827 1237 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms