RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 POTEEQ6S8J3 1075 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 PIDD1Q9HB75 910 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 PI4K2BG5E9Z4 385 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 PODXLO00592 558 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 MRPL4Q9BYD3 311 aaKnown RBP19.26■□□□□ 0.67
COL18A1-202ENST00000355480 TXLNGQ9NUQ3 528 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 NFU1Q9UMS0 254 aa19.26■□□□□ 0.67
COL18A1-202ENST00000355480 MIF4GDA9UHW6 222 aaKnown RBP19.25■□□□□ 0.67
COL18A1-202ENST00000355480 APOEP02649 317 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 VAMP7P51809 220 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 ADCY2Q08462 1091 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 KCNH2Q12809 1159 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 STAP1Q9ULZ2 295 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 SYNGAP1Q96PV0 1343 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 ESRRBO95718 433 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 TBXAS1P24557 533 aaPredicted RBP19.25■□□□□ 0.67
COL18A1-202ENST00000355480 KNOP1Q1ED39 458 aaKnown RBP19.25■□□□□ 0.67
COL18A1-202ENST00000355480 ZNF579Q8NAF0 562 aaKnown RBP19.25■□□□□ 0.67
COL18A1-202ENST00000355480 CCDC188H7C350 402 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 STAT3P40763 770 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 PSMC5P62195 406 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 NOP14P78316 857 aaKnown RBP19.25■□□□□ 0.67
COL18A1-202ENST00000355480 ALS2CLQ60I27 953 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 SZRD1Q7Z422 152 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 SNX19Q92543 992 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 SPATA17Q96L03 361 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 SUN2Q9UH99 717 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 LCMT1Q9UIC8 334 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 PVALEFA0A1B0GWK0 134 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 ZBTB41Q5SVQ8 909 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 LXNQ9BS40 222 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 LY9Q9HBG7 655 aa19.25■□□□□ 0.67
COL18A1-202ENST00000355480 XAB2Q9HCS7 855 aaKnown RBP19.25■□□□□ 0.67
COL18A1-202ENST00000355480 TMEM247A6NEH6 219 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 LGALS16A8MUM7 142 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 HSP90AA5PQ58FG0 334 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 SCG3Q8WXD2 468 aaKnown RBP19.24■□□□□ 0.67
COL18A1-202ENST00000355480 LRRC53A6NM62 1247 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 COPEO14579 308 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 NR1D1P20393 614 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 GIPC2Q8TF65 315 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 ACAP3Q96P50 834 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 SERPINI1Q99574 410 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 TPX2Q9ULW0 747 aaKnown RBP19.24■□□□□ 0.67
COL18A1-202ENST00000355480 SAMD9LQ8IVG5 1584 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 ESRRAP11474 423 aaPredicted RBP19.24■□□□□ 0.67
COL18A1-202ENST00000355480 GCKP35557 465 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 TTC17Q96AE7 1141 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 PCSK1NQ9UHG2 260 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 MBD5Q9P267 1494 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 SPATA31E1Q6ZUB1 1445 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 TRPA1O75762 1119 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 ADORA2BP29275 332 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 TXNRD1Q16881 649 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 CRLF3Q8IUI8 442 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 RMDN2Q96LZ7 410 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 PACSIN2Q9UNF0 486 aaPredicted RBP19.24■□□□□ 0.67
COL18A1-202ENST00000355480 SNX24Q9Y343 169 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 PRCPP42785 496 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 SAAL1Q96ER3 474 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 FAM217BQ9NTX9 383 aaPredicted RBP19.24■□□□□ 0.67
COL18A1-202ENST00000355480 BARHL2Q9NY43 387 aa19.24■□□□□ 0.67
COL18A1-202ENST00000355480 MRPS25P82663 173 aaKnown RBP19.23■□□□□ 0.67
COL18A1-202ENST00000355480 PDCD2Q16342 344 aaPredicted RBP19.23■□□□□ 0.67
COL18A1-202ENST00000355480 AXIN2Q9Y2T1 843 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 GNA15P30679 374 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 RPAP3Q9H6T3 665 aaPredicted RBP19.23■□□□□ 0.67
COL18A1-202ENST00000355480 CCDC151A5D8V7 595 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 EEF1B2P24534 225 aaKnown RBP19.23■□□□□ 0.67
COL18A1-202ENST00000355480 PSMC1P62191 440 aaKnown RBP19.23■□□□□ 0.67
COL18A1-202ENST00000355480 TMPRSS15P98073 1019 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 TRMT10CQ7L0Y3 403 aaKnown RBP19.23■□□□□ 0.67
COL18A1-202ENST00000355480 TRAIPQ9BWF2 469 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 THEGQ9P2T0 379 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 GOLGA8MH3BSY2 632 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 MOCS2O96007 188 aaPredicted RBP19.23■□□□□ 0.67
COL18A1-202ENST00000355480 LCA5Q86VQ0 697 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 OVOS2A0A0G2JMS6 1433 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 OVOS2A0A0J9YW53 1432 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 OVOS2Q6IE36 1432 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 CPB1P15086 417 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 NME3Q13232 169 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 ACCSLQ4AC99 568 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 KRT39Q6A163 491 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 CYFIP1Q7L576 1253 aa19.23■□□□□ 0.67
COL18A1-202ENST00000355480 RNF25Q96BH1 459 aaPredicted RBP19.23■□□□□ 0.67
COL18A1-202ENST00000355480 MXD4Q14582 209 aaPredicted RBP19.22■□□□□ 0.67
COL18A1-202ENST00000355480 N4BP2L2Q92802 583 aaPredicted RBP19.22■□□□□ 0.67
COL18A1-202ENST00000355480 MAGEB5Q9BZ81 275 aa19.22■□□□□ 0.67
COL18A1-202ENST00000355480 A8MXQ7 604 aa19.22■□□□□ 0.67
COL18A1-202ENST00000355480 GFPT1Q06210 699 aaPredicted RBP19.22■□□□□ 0.67
COL18A1-202ENST00000355480 INTS2Q9H0H0 1204 aaKnown RBP19.22■□□□□ 0.67
COL18A1-202ENST00000355480 UPF3AQ9H1J1 476 aaKnown RBP19.22■□□□□ 0.67
COL18A1-202ENST00000355480 SARS2Q9NP81 518 aaKnown RBP19.22■□□□□ 0.67
COL18A1-202ENST00000355480 CPSF1Q10570 1443 aaKnown RBP19.22■□□□□ 0.67
COL18A1-202ENST00000355480 KRT38O76015 456 aa19.22■□□□□ 0.67
COL18A1-202ENST00000355480 FBXO41Q8TF61 875 aa19.22■□□□□ 0.67
COL18A1-202ENST00000355480 NUP85Q9BW27 656 aa19.22■□□□□ 0.67
COL18A1-202ENST00000355480 F5H423 210 aaPredicted RBP19.22■□□□□ 0.67
COL18A1-202ENST00000355480 DNAJC8O75937 253 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms