RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 GPBP1Q86WP2 473 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 TRIM59Q8IWR1 403 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 GLIS3Q8NEA6 775 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 SCFD1Q8WVM8 642 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 BADQ92934 168 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 JAKMIP2Q96AA8 810 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 EEF2KMTQ96G04 330 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 LBHD1Q9BQE6 289 aaPredicted RBP12.15□□□□□ -0.46
SNU13-202ENST00000355257 UPF3AQ9H1J1 476 aaKnown RBP12.15□□□□□ -0.46
SNU13-202ENST00000355257 A1CFQ9NQ94 594 aaKnown RBP12.15□□□□□ -0.46
SNU13-202ENST00000355257 VAV3Q9UKW4 847 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 FAM184BQ9ULE4 1060 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 TRAF3IP3Q9Y228 551 aa12.15□□□□□ -0.46
SNU13-202ENST00000355257 SOWAHBA6NEL2 793 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 KIAA0355O15063 1070 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 MSH4O15457 936 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 DUSP11O75319 330 aaKnown RBP12.14□□□□□ -0.47
SNU13-202ENST00000355257 IPO7O95373 1038 aaKnown RBP12.14□□□□□ -0.47
SNU13-202ENST00000355257 MUTP22033 750 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 ACLYP53396 1101 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 KCNMA1Q12791 1236 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 GIT2Q14161 759 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 BMT2Q1RMZ1 405 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 ASTE1Q2TB18 679 aaPredicted RBP12.14□□□□□ -0.47
SNU13-202ENST00000355257 PRR16Q569H4 304 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 HERC4Q5GLZ8 1057 aaPredicted RBP12.14□□□□□ -0.47
SNU13-202ENST00000355257 CCDC122Q5T0U0 273 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 FAM109BQ6ICB4 259 aaPredicted RBP12.14□□□□□ -0.47
SNU13-202ENST00000355257 PDXDC1Q6P996 788 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 ARMCX2Q7L311 632 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 EPM2AIP1Q7L775 607 aaPredicted RBP12.14□□□□□ -0.47
SNU13-202ENST00000355257 ANKRD35Q8N283 1001 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 CHURC1Q8WUH1 139 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 CCDC42Q96M95 316 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 PCMTD1Q96MG8 357 aaPredicted RBP12.14□□□□□ -0.47
SNU13-202ENST00000355257 ABHD16BQ9H3Z7 469 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 ACAD9Q9H845 621 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 ANKZF1Q9H8Y5 726 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 PRDM5Q9NQX1 630 aaPredicted RBP12.14□□□□□ -0.47
SNU13-202ENST00000355257 RNF146Q9NTX7 359 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 ARHGAP20Q9P2F6 1191 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 PRKAG2Q9UGJ0 569 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 ZHX1Q9UKY1 873 aaPredicted RBP12.14□□□□□ -0.47
SNU13-202ENST00000355257 GUCA1BQ9UMX6 200 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 DNM3Q9UQ16 869 aa12.14□□□□□ -0.47
SNU13-202ENST00000355257 IGLV3-22A0A075B6J6 115 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 CTAGE15A4D2H0 777 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 RCCD1A6NED2 376 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 ZNF263O14978 683 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 EPHB6O15197 1021 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 PJA2O43164 708 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 CLTBP09497 229 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 CTAGE8P0CG41 777 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 EPHB4P54760 987 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 GJA9P57773 515 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 FAAP100Q0VG06 881 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 MUM1L1Q5H9M0 696 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 ANKRD33Q7Z3H0 272 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 CTAGE6Q86UF2 777 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 CTAGE4Q8IX94 777 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 RPGRIP1Q96KN7 1286 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 GUCD1Q96NT3 240 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 LACRTQ9GZZ8 138 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 RANBP17Q9H2T7 1088 aaKnown RBP12.13□□□□□ -0.47
SNU13-202ENST00000355257 ARFGAP3Q9NP61 516 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 HOMER2Q9NSB8 354 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 TRIM10Q9UDY6 481 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 STXBP5LQ9Y2K9 1186 aa12.13□□□□□ -0.47
SNU13-202ENST00000355257 MOXD2PA6NHM9 499 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 RBAK-RBAKDNI3L0D1 243 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 EYA4O95677 639 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 PRLRP16471 622 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 PLA2G4AP47712 749 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 CDK7P50613 346 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 SNAP25P60880 206 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 SPA17Q15506 151 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 KCNA10Q16322 511 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 TKFCQ3LXA3 575 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 KIAA1328Q86T90 577 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 NEK11Q8NG66 645 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 TOX2Q96NM4 488 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 TRERF1Q96PN7 1200 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 HSD17B14Q9BPX1 270 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 FGFBP2Q9BYJ0 223 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 EPC1Q9H2F5 836 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 MMRN2Q9H8L6 949 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 TUFT1Q9NNX1 390 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 CEP72Q9P209 647 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 CTDP1Q9Y5B0 961 aaPredicted RBP12.12□□□□□ -0.47
SNU13-202ENST00000355257 GBF1Q92538 1859 aa12.12□□□□□ -0.47
SNU13-202ENST00000355257 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.11□□□□□ -0.47
SNU13-202ENST00000355257 PDXKO00764 312 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 MAP2K7O14733 419 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 USO1O60763 962 aaKnown RBP12.11□□□□□ -0.47
SNU13-202ENST00000355257 NOL4O94818 638 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 SSBP05455 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNU13-202ENST00000355257 KIF5AQ12840 1032 aa12.11□□□□□ -0.47
SNU13-202ENST00000355257 IKQ13123 557 aaPredicted RBP12.11□□□□□ -0.47
SNU13-202ENST00000355257 PPP2R5CQ13362 524 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms