RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SYTL5Q8TDW5 730 aaPredicted RBP24.21■■□□□ 1.47
NKX2-1-201ENST00000354822 U2AF1L4Q8WU68 220 aaKnown RBP24.21■■□□□ 1.47
NKX2-1-201ENST00000354822 SUCLA2Q9P2R7 463 aaPredicted RBP24.21■■□□□ 1.47
NKX2-1-201ENST00000354822 SAMM50Q9Y512 469 aa24.21■■□□□ 1.47
NKX2-1-201ENST00000354822 MYH11P35749 1972 aa24.21■■□□□ 1.47
NKX2-1-201ENST00000354822 NFKBIEO00221 500 aa24.2■■□□□ 1.47
NKX2-1-201ENST00000354822 P4HA2O15460 535 aa24.2■■□□□ 1.47
NKX2-1-201ENST00000354822 OPA1O60313 960 aa24.2■■□□□ 1.47
NKX2-1-201ENST00000354822 ALAS1P13196 640 aa24.2■■□□□ 1.47
NKX2-1-201ENST00000354822 PLS3P13797 630 aa24.2■■□□□ 1.47
NKX2-1-201ENST00000354822 RPS12P25398 132 aaKnown RBP24.2■■□□□ 1.47
NKX2-1-201ENST00000354822 MTMR1Q13613 665 aa24.2■■□□□ 1.47
NKX2-1-201ENST00000354822 SLC17A8Q8NDX2 589 aa24.2■■□□□ 1.47
NKX2-1-201ENST00000354822 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.2■■□□□ 1.47
NKX2-1-201ENST00000354822 IWS1Q96ST2 819 aa24.2■■□□□ 1.47
NKX2-1-201ENST00000354822 HINFPQ9BQA5 517 aa24.2■■□□□ 1.47
NKX2-1-201ENST00000354822 HEXIM1O94992 359 aaKnown RBP24.2■■□□□ 1.46
NKX2-1-201ENST00000354822 FDX1P10109 184 aa24.2■■□□□ 1.46
NKX2-1-201ENST00000354822 RARRES1P49788 294 aa24.2■■□□□ 1.46
NKX2-1-201ENST00000354822 ZSCAN26Q16670 478 aa24.2■■□□□ 1.46
NKX2-1-201ENST00000354822 PEX26Q7Z412 305 aa24.2■■□□□ 1.46
NKX2-1-201ENST00000354822 CALR3Q96L12 384 aaKnown RBP24.2■■□□□ 1.46
NKX2-1-201ENST00000354822 KRT12Q99456 494 aa24.2■■□□□ 1.46
NKX2-1-201ENST00000354822 ST6GALNAC4Q9H4F1 302 aa24.2■■□□□ 1.46
NKX2-1-201ENST00000354822 RPS6KA5O75582 802 aa24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 GLI1P08151 1106 aa24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 MRPS9P82933 396 aaKnown RBP24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 ITGB3BPQ13352 177 aaPredicted RBP24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 CPXCR1Q8N123 301 aa24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 EIF1ADQ8N9N8 165 aaKnown RBP24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 IL31RAQ8NI17 732 aa24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 EPB41L5Q9HCM4 733 aa24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 CWC15Q9P013 229 aaKnown RBP24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 MAPK13O15264 365 aa24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 CTNND1O60716 968 aaKnown RBP24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 GALCP54803 685 aa24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 MRPS25P82663 173 aaKnown RBP24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 CCDC125Q86Z20 511 aa24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 PKD2L1Q9P0L9 805 aa24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 CTDP1Q9Y5B0 961 aaPredicted RBP24.19■■□□□ 1.46
NKX2-1-201ENST00000354822 GOLGA8KD6RF30 607 aa24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 TMEM253P0C7T8 217 aa24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 TRIM49P0CI25 452 aa24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 TRIM49CP0CI26 452 aa24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 GUCY2DQ02846 1103 aa24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 C4orf19Q8IY42 314 aa24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 LNX1Q8TBB1 728 aaPredicted RBP24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 FBXO41Q8TF61 875 aa24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 SCFD2Q8WU76 684 aa24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 ZBTB9Q96C00 473 aa24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 CCDC43Q96MW1 224 aaKnown RBP24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 RAVER2Q9HCJ3 691 aaKnown RBP24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 STXBP5LQ9Y2K9 1186 aa24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 HSF2BPO75031 334 aa24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 YWHABP31946 246 aaKnown RBP24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 SYT11Q9BT88 431 aa24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 GPR88Q9GZN0 384 aa24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 PPP1R9AQ9ULJ8 1098 aa24.18■■□□□ 1.46
NKX2-1-201ENST00000354822 CEP104O60308 925 aa24.17■■□□□ 1.46
NKX2-1-201ENST00000354822 ZBED4O75132 1171 aa24.17■■□□□ 1.46
NKX2-1-201ENST00000354822 IVLP07476 585 aa24.17■■□□□ 1.46
NKX2-1-201ENST00000354822 SFNP31947 248 aa24.17■■□□□ 1.46
NKX2-1-201ENST00000354822 JAK3P52333 1124 aa24.17■■□□□ 1.46
NKX2-1-201ENST00000354822 GTF2BQ00403 316 aa24.17■■□□□ 1.46
NKX2-1-201ENST00000354822 SH3GL2Q99962 352 aa24.17■■□□□ 1.46
NKX2-1-201ENST00000354822 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.17■■□□□ 1.46
NKX2-1-201ENST00000354822 CCDC188H7C350 402 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 PGRMC1O00264 195 aaKnown RBP24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 TNFAIP3P21580 790 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 VAMP7P51809 220 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 PPFIA1Q13136 1202 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 PLS1Q14651 629 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 KIF22Q14807 665 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 MAEAQ7L5Y9 396 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 DAAM2Q86T65 1068 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 GLYCTKQ8IVS8 523 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 RDH13Q8NBN7 331 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 LMO3Q8TAP4 145 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 WHAMMQ8TF30 809 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 CTNNBL1Q8WYA6 563 aaPredicted RBP24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 RFFLQ8WZ73 363 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 TEPSINQ96N21 525 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 RUFY1Q96T51 708 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 AMFRQ9UKV5 643 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 NCANO14594 1321 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 TMCO5BA8MYB1 307 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 RPS6P62753 249 aaKnown RBP24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 PGM5Q15124 567 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 XRRA1Q6P2D8 792 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 RASGEF1CQ8N431 466 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 METTL13Q8N6R0 699 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 XXYLT1Q8NBI6 393 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 FAM76AQ8TAV0 307 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 RIN2Q8WYP3 895 aaPredicted RBP24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 TAAR1Q96RJ0 339 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 PPP1R1BQ9UD71 204 aaPredicted RBP24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 TCEAL9Q9UHQ7 104 aa24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 DIS3Q9Y2L1 958 aaKnown RBP24.16■■□□□ 1.46
NKX2-1-201ENST00000354822 GOLGA6CA6NDK9 693 aa24.15■■□□□ 1.46
NKX2-1-201ENST00000354822 PMM2O15305 246 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms