RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 JAG2Q9Y219 1238 aa13.24□□□□□ -0.29
TRERF1-202ENST00000354325 NUP188Q5SRE5 1749 aa13.24□□□□□ -0.29
TRERF1-202ENST00000354325 GTPBP10A4D1E9 387 aaKnown RBP13.24□□□□□ -0.29
TRERF1-202ENST00000354325 A6NHS1 94 aa13.24□□□□□ -0.29
TRERF1-202ENST00000354325 ITGA4P13612 1032 aa13.24□□□□□ -0.29
TRERF1-202ENST00000354325 RFX1P22670 979 aa13.24□□□□□ -0.29
TRERF1-202ENST00000354325 RPS6KA3P51812 740 aa13.24□□□□□ -0.29
TRERF1-202ENST00000354325 KCNQ4P56696 695 aa13.24□□□□□ -0.29
TRERF1-202ENST00000354325 GPBP1Q86WP2 473 aa13.24□□□□□ -0.29
TRERF1-202ENST00000354325 RIBC1Q8N443 379 aaPredicted RBP13.24□□□□□ -0.29
TRERF1-202ENST00000354325 LRRC8CQ8TDW0 803 aa13.24□□□□□ -0.29
TRERF1-202ENST00000354325 TMEM237Q96Q45 408 aa13.24□□□□□ -0.29
TRERF1-202ENST00000354325 PDP2Q9P2J9 529 aa13.24□□□□□ -0.29
TRERF1-202ENST00000354325 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
TRERF1-202ENST00000354325 PKD1L3Q7Z443 1732 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 CASZ1Q86V15 1759 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 BRAFP15056 766 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 FLT3P36888 993 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 SLCO1A2P46721 670 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 GALNT15Q8N3T1 639 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 BLOC1S4Q9NUP1 217 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 CYP39A1Q9NYL5 469 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 ADAM22Q9P0K1 906 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 PPP1R1BQ9UD71 204 aaPredicted RBP13.23□□□□□ -0.29
TRERF1-202ENST00000354325 LRRC42Q9Y546 428 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 DCDC2CA8MYV0 355 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 M0R2N6 131 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 RIPK2O43353 540 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 CETN2P41208 172 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 GALCP54803 685 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 MKRN4PQ13434 485 aaPredicted RBP13.23□□□□□ -0.29
TRERF1-202ENST00000354325 KIF2BQ8N4N8 673 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 FBXO25Q8TCJ0 367 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 PARD3BQ8TEW8 1205 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 FGD4Q96M96 766 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 TXLNGYQ9BZA5 131 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 NCANO14594 1321 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 DUOX1Q9NRD9 1551 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 ZWINTO95229 277 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 KRT16P08779 473 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 TROVE2P10155 538 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRERF1-202ENST00000354325 IL6STP40189 918 aaPredicted RBP13.23□□□□□ -0.29
TRERF1-202ENST00000354325 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRERF1-202ENST00000354325 STXBP5LQ9Y2K9 1186 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 LRCH1Q9Y2L9 728 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 ACTL7BQ9Y614 415 aa13.23□□□□□ -0.29
TRERF1-202ENST00000354325 ANKRD62A6NC57 917 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 CREB3O43889 395 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 RTN3O95197 1032 aaPredicted RBP13.22□□□□□ -0.29
TRERF1-202ENST00000354325 BCRP11274 1271 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 VHLP40337 213 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 GRIPAP1Q4V328 841 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 FAM182BQ5T319 152 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 TMEM154Q6P9G4 183 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 RBBP8NLQ8NC74 664 aaPredicted RBP13.22□□□□□ -0.29
TRERF1-202ENST00000354325 KCNV2Q8TDN2 545 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 CCDC28BQ9BUN5 200 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 WNT8AQ9H1J5 351 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 PCYOX1Q9UHG3 505 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 PCDHA12Q9UN75 941 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 MYH2Q9UKX2 1941 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 KIAA0391O15091 583 aaKnown RBP13.22□□□□□ -0.29
TRERF1-202ENST00000354325 NVLO15381 856 aaKnown RBP13.22□□□□□ -0.29
TRERF1-202ENST00000354325 THAP12O43422 761 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 CCNB1P14635 433 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 SF3A3Q12874 501 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRERF1-202ENST00000354325 TMEM119Q4V9L6 283 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 PPP1R18Q6NYC8 613 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 SMC1BQ8NDV3 1235 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 LRMDAQ9H2I8 198 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 GCNT4Q9P109 453 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 ASIC3Q9UHC3 531 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 PDXKO00764 312 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 IFI35P80217 286 aaPredicted RBP13.22□□□□□ -0.29
TRERF1-202ENST00000354325 AUHQ13825 339 aaKnown RBP13.22□□□□□ -0.29
TRERF1-202ENST00000354325 ZCWPW2Q504Y3 356 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 IRF2BP2Q7Z5L9 587 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 ITFG2Q969R8 447 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 SENP1Q9P0U3 644 aa13.22□□□□□ -0.29
TRERF1-202ENST00000354325 BIN2Q9UBW5 565 aaPredicted RBP13.22□□□□□ -0.29
TRERF1-202ENST00000354325 CDH16O75309 829 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 KLRC3Q07444 240 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 HLFQ16534 295 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 CCDC137Q6PK04 289 aaKnown RBP13.21□□□□□ -0.29
TRERF1-202ENST00000354325 SLC35G2Q8TBE7 412 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 ZDHHC18Q9NUE0 388 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.21□□□□□ -0.29
TRERF1-202ENST00000354325 NMT2O60551 498 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 EYA4O95677 639 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 ITIH2P19823 946 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 SOX5P35711 763 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 TNNI2P48788 182 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 LAMB3Q13751 1172 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 SPARCL1Q14515 664 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 STAT4Q14765 748 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 MTFR1Q15390 333 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 CCDC174Q6PII3 467 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 SYNE4Q8N205 404 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 FOXP3Q9BZS1 431 aa13.21□□□□□ -0.29
TRERF1-202ENST00000354325 AGAP1Q9UPQ3 857 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms