RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 CEP89Q96ST8 783 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 STRA6Q9BX79 667 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 PRDM10Q9NQV6 1147 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 TRIM10Q9UDY6 481 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 DNAJC12Q9UKB3 198 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 NENFQ9UMX5 172 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 UTP11Q9Y3A2 253 aaKnown RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 SCN9AQ15858 1988 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 FAM196BA6NMK8 535 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 F8VZ95 297 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 OPLAHO14841 1288 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 POLR3GO15318 223 aaPredicted RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 SART1O43290 800 aaKnown RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 CYP4A11Q02928 519 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 PGM5Q15124 567 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 SURF1Q15526 300 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 SLFN12LQ6IEE8 588 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 RUFY4Q6ZNE9 571 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 SLC51AQ86UW1 340 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 CHST13Q8NET6 341 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 TPCN2Q8NHX9 752 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 BORCS6Q96GS4 357 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 TRERF1Q96PN7 1200 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 MOV10L1Q9BXT6 1211 aaKnown RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 LACRTQ9GZZ8 138 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 ZMYND15Q9H091 742 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 WNT8AQ9H1J5 351 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 ATP6V0A4Q9HBG4 840 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 PXMP2Q9NR77 195 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 HDAC6Q9UBN7 1215 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 MTUS1Q9ULD2 1270 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 A0A1W2PRG0 241 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 BUB1O43683 1085 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 RTN2O75298 545 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 PPP1R37O75864 691 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 RAD17O75943 681 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 AKAP3O75969 853 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 DPEP1P16444 411 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 GARTP22102 1010 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 RFC5P40937 340 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 ECE1P42892 770 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 PDE6CP51160 858 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 EIF3BP55884 814 aaKnown RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 SNAP25P60880 206 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 CACNB1Q02641 598 aaPredicted RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 PTK2Q05397 1052 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 STRN3Q13033 797 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 FAM160B1Q5W0V3 765 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 KCNV1Q6PIU1 500 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 TRIM72Q6ZMU5 477 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 SYDE1Q6ZW31 735 aaPredicted RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 IRF2BP2Q7Z5L9 587 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 SLFN11Q7Z7L1 901 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 SPICE1Q8N0Z3 855 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 DNERQ8NFT8 737 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 NSUN6Q8TEA1 469 aaKnown RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 U2AF1L4Q8WU68 220 aaKnown RBP4.04□□□□□ -1.76
RNF38-203ENST00000353739 RPS6KC1Q96S38 1066 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 AGPAT1Q99943 283 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 ISCUQ9H1K1 167 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 KCNH7Q9NS40 1196 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 NAGPAQ9UK23 515 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 CAPN6Q9Y6Q1 641 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 PHIPQ8WWQ0 1821 aa4.04□□□□□ -1.76
RNF38-203ENST00000353739 LOC102724159A0A0B4J2E5 919 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 GOLGA6CA6NDK9 693 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 HMGB1P1B2RPK0 211 aaPredicted RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 EML1O00423 815 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 ZNF263O14978 683 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 RNF40O75150 1001 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 SASH3O75995 380 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 MTA2O94776 668 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 PLEKP08567 350 aaPredicted RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 GOLGA6DP0CG33 693 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 GZMAP12544 262 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 ALAS1P13196 640 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 CTNNA2P26232 953 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 ACTN2P35609 894 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 CETN2P41208 172 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 CYP2J2P51589 502 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 YWHAEP62258 255 aaKnown RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 PSMC6P62333 389 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 PWP2Q15269 919 aaKnown RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 NFRKBQ6P4R8 1299 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 NOA1Q8NC60 698 aaKnown RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 C3orf20Q8ND61 904 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 RBM46Q8TBY0 533 aaKnown RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 FAM167AQ96KS9 214 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 JPH2Q9BR39 696 aaPredicted RBP4.03□□□□□ -1.76
RNF38-203ENST00000353739 TMEM8AQ9HCN3 771 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 SIX2Q9NPC8 291 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 GOLGA6AQ9NYA3 693 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 HOXC10Q9NYD6 342 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 UVRAGQ9P2Y5 699 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 IGSF9BQ9UPX0 1349 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 RCCD1A6NED2 376 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 DCAF8L1A6NGE4 600 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 TMCO5BA8MYB1 307 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 KCNK3O14649 394 aa4.03□□□□□ -1.76
RNF38-203ENST00000353739 EPHB6O15197 1021 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms