RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 CHL1O00533 1208 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 HLFQ16534 295 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 MYCBPQ99417 103 aaPredicted RBP10.65□□□□□ -0.7
COL11A1-201ENST00000353414 LRRC53A6NM62 1247 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 PFKFB2O60825 505 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 KIZQ2M2Z5 673 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 SLC17A8Q8NDX2 589 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 DCTN4Q9UJW0 460 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 PRAG1Q86YV5 1406 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 CTNND1O60716 968 aaKnown RBP10.65□□□□□ -0.7
COL11A1-201ENST00000353414 ESRRAP11474 423 aaPredicted RBP10.65□□□□□ -0.7
COL11A1-201ENST00000353414 ETFBP38117 255 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 TBC1D9BQ66K14 1250 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 BEST2Q8NFU1 509 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 DHX35Q9H5Z1 703 aaKnown RBP10.65□□□□□ -0.7
COL11A1-201ENST00000353414 ANKRD65E5RJM6 399 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 DNAJC8O75937 253 aaPredicted RBP10.65□□□□□ -0.7
COL11A1-201ENST00000353414 AKT1P31749 480 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 SEPT2Q15019 361 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 MAPK6Q16659 721 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 SYTL3Q4VX76 610 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 ZC3H18Q86VM9 953 aaKnown RBP10.65□□□□□ -0.7
COL11A1-201ENST00000353414 AIPL1Q9NZN9 384 aa10.65□□□□□ -0.7
COL11A1-201ENST00000353414 PPARGC1AQ9UBK2 798 aaKnown RBP10.65□□□□□ -0.7
COL11A1-201ENST00000353414 USP17L10C9JJH3 530 aa10.65□□□□□ -0.71
COL11A1-201ENST00000353414 CYP2B6P20813 491 aa10.65□□□□□ -0.71
COL11A1-201ENST00000353414 GYS2P54840 703 aa10.65□□□□□ -0.71
COL11A1-201ENST00000353414 DR1Q01658 176 aa10.65□□□□□ -0.71
COL11A1-201ENST00000353414 TTC23LQ6PF05 361 aa10.65□□□□□ -0.71
COL11A1-201ENST00000353414 C11orf57Q6ZUT1 292 aaPredicted RBP10.65□□□□□ -0.71
COL11A1-201ENST00000353414 GIPC2Q8TF65 315 aa10.65□□□□□ -0.71
COL11A1-201ENST00000353414 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.65□□□□□ -0.71
COL11A1-201ENST00000353414 MXD3Q9BW11 206 aa10.65□□□□□ -0.71
COL11A1-201ENST00000353414 TRIM49BA6NDI0 452 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 KRT14P02533 472 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 VCAM1P19320 739 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 RGS7P49802 495 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 MAP3K7CLP57077 242 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 MCTP2Q6DN12 878 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 SPATS2Q86XZ4 545 aaKnown RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 DRC3Q9H069 523 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 SUN2Q9UH99 717 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 DBNLQ9UJU6 430 aaKnown RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 PACSIN2Q9UNF0 486 aaPredicted RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 EIF3CLB5ME19 914 aaKnown RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 MEFVO15553 781 aaPredicted RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 TTI1O43156 1089 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 NPM3O75607 178 aaKnown RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 FCER1AP12319 257 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 PRAMEP78395 509 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 MTM1Q13496 603 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 ANGPT1Q15389 498 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 ZNF658Q5TYW1 1059 aaPredicted RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 LVRNQ6Q4G3 990 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 RRM2BQ7LG56 351 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 GPT2Q8TD30 523 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 DHX38Q92620 1227 aaKnown RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 DPF3Q92784 378 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 NAF1Q96HR8 494 aaKnown RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 CCDC17Q96LX7 622 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 EIF3CQ99613 913 aaKnown RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 POLR3FQ9H1D9 316 aaPredicted RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 GOLGA8QA0A0J9YX86 632 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 GOLGA8OA6NCC3 632 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 GOLGA8NF8WBI6 632 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 CCDC159P0C7I6 412 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 WEE1P30291 646 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 FASTKD1Q53R41 847 aaKnown RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 PKN3Q6P5Z2 889 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 NUP93Q8N1F7 819 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 ING2Q9H160 280 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 TJP2Q9UDY2 1190 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 KCNH4Q9UQ05 1017 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 SAMD9Q5K651 1589 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 UGGT2Q9NYU1 1516 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 A8MXQ7 604 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 TNPO2O14787 897 aaKnown RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 ADD2P35612 726 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 PAPOLAP51003 745 aaKnown RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 ESRRGP62508 458 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 PRR23CQ6ZRP0 262 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 CRLF3Q8IUI8 442 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 SPATA2LQ8IUW3 424 aaPredicted RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 RTKN2Q8IZC4 609 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 DCUN1D1Q96GG9 259 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 L3MBTL3Q96JM7 780 aaPredicted RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 ATP6V0A4Q9HBG4 840 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 KLF15Q9UIH9 416 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 TMCC1O94876 653 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 TBL3Q12788 808 aaKnown RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 SLC24A3Q9HC58 644 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 PNMA8BQ9ULN7 279 aaPredicted RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 PYCARDQ9ULZ3 195 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 PNMA6FA0A0J9YX94 578 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 KBTBD13C9JR72 458 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 PDHA1P08559 390 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 CMA1P23946 247 aa10.64□□□□□ -0.71
COL11A1-201ENST00000353414 PBLDP30039 288 aaPredicted RBP10.64□□□□□ -0.71
COL11A1-201ENST00000353414 IFNA8P32881 189 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms