RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 CEP70Q8NHQ1 597 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 XAGE3Q8WTP9 111 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 SCFD2Q8WU76 684 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 TRIM11Q96F44 468 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 ZMYND12Q9H0C1 365 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 SEC63Q9UGP8 760 aaKnown RBP11.46□□□□□ -0.57
CAPN3-203ENST00000349748 RASAL2Q9UJF2 1139 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 WASF2Q9Y6W5 498 aa11.46□□□□□ -0.57
CAPN3-203ENST00000349748 PASKQ96RG2 1323 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 FAM196BA6NMK8 535 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 CCDC169A6NNP5 214 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 KRIT1O00522 736 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 MAP3K7O43318 606 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 LCA5LO95447 670 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 RPN1P04843 607 aaKnown RBP11.46□□□□□ -0.58
CAPN3-203ENST00000349748 GSTT2P0CG29 244 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 GSTT2BP0CG30 244 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 T-ENOLP0DO92 83 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 HALP42357 657 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 USP11P51784 963 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 ARHGAP27Q6ZUM4 889 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 TAF4BQ92750 862 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 ARHGEF2Q92974 986 aaKnown RBP11.46□□□□□ -0.58
CAPN3-203ENST00000349748 PPP2R3CQ969Q6 453 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 CENPOQ9BU64 300 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 QTRT2Q9H974 415 aaKnown RBP11.46□□□□□ -0.58
CAPN3-203ENST00000349748 FAM217BQ9NTX9 383 aaPredicted RBP11.46□□□□□ -0.58
CAPN3-203ENST00000349748 STK32BQ9NY57 414 aa11.46□□□□□ -0.58
CAPN3-203ENST00000349748 LARSQ9P2J5 1176 aaKnown RBP11.46□□□□□ -0.58
CAPN3-203ENST00000349748 EP400Q96L91 3159 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 TMEM120BA0PK00 339 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 ECE2O60344 883 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 RNASEH1O60930 286 aaKnown RBP11.45□□□□□ -0.58
CAPN3-203ENST00000349748 CDK4P11802 303 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 MTIF2P46199 727 aaKnown RBP11.45□□□□□ -0.58
CAPN3-203ENST00000349748 EMP3P54852 163 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 TDRD12Q587J7 1177 aaKnown RBP11.45□□□□□ -0.58
CAPN3-203ENST00000349748 ACSBG2Q5FVE4 666 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 ZNF790Q6PG37 636 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 CYB5R4Q7L1T6 521 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 NEK9Q8TD19 979 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 ZNF496Q96IT1 587 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-203ENST00000349748 MPHOSPH6Q99547 160 aaKnown RBP11.45□□□□□ -0.58
CAPN3-203ENST00000349748 NOC4LQ9BVI4 516 aaKnown RBP11.45□□□□□ -0.58
CAPN3-203ENST00000349748 TXLNGYQ9BZA5 131 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 BTBD7Q9P203 1132 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 CHKBQ9Y259 395 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 C5P01031 1676 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 MYO5AQ9Y4I1 1855 aaKnown RBP11.45□□□□□ -0.58
CAPN3-203ENST00000349748 COL22A1Q8NFW1 1626 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-203ENST00000349748 SIPA1L3O60292 1781 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-203ENST00000349748 GOLGA8AA7E2F4 631 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 BHMG1C9JSJ3 638 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-203ENST00000349748 OPHN1O60890 802 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 DDX58O95786 925 aaKnown RBP11.45□□□□□ -0.58
CAPN3-203ENST00000349748 TXKP42681 527 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 PMS2P54278 862 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 GEMIN4P57678 1058 aaKnown RBP11.45□□□□□ -0.58
CAPN3-203ENST00000349748 SLC34A1Q06495 639 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 EAPPQ56P03 285 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-203ENST00000349748 EARS2Q5JPH6 523 aaKnown RBP11.45□□□□□ -0.58
CAPN3-203ENST00000349748 C4orf50Q6ZRC1 276 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 COPS6Q7L5N1 327 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 ADSSL1Q8N142 457 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 CSGALNACT2Q8N6G5 542 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 PPFIBP2Q8ND30 876 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 TGS1Q96RS0 853 aaKnown RBP11.45□□□□□ -0.58
CAPN3-203ENST00000349748 PACSIN1Q9BY11 444 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 TAOK3Q9H2K8 898 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 MMRN2Q9H8L6 949 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 TMOD3Q9NYL9 352 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 TMED5Q9Y3A6 229 aa11.45□□□□□ -0.58
CAPN3-203ENST00000349748 AGTP01019 485 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 PABPC4LP0CB38 370 aaKnown RBP11.44□□□□□ -0.58
CAPN3-203ENST00000349748 IDO1P14902 403 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 SSRP1Q08945 709 aaKnown RBP11.44□□□□□ -0.58
CAPN3-203ENST00000349748 AP1B1Q10567 949 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 RNF43Q68DV7 783 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 ERMNQ8TAM6 284 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 PPP1R14BQ96C90 147 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 NEUROD6Q96NK8 337 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 PABPC3Q9H361 631 aaKnown RBP11.44□□□□□ -0.58
CAPN3-203ENST00000349748 CUEDC2Q9H467 287 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 KCNK9Q9NPC2 374 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 NOC2LQ9Y3T9 749 aaKnown RBP11.44□□□□□ -0.58
CAPN3-203ENST00000349748 ZBTB43O43298 467 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 LMNAP02545 664 aaKnown RBP11.44□□□□□ -0.58
CAPN3-203ENST00000349748 NUDT17P0C025 328 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 TROVE2P10155 538 aaKnown RBP eCLIP11.44□□□□□ -0.58
CAPN3-203ENST00000349748 PORP16435 677 aaPredicted RBP11.44□□□□□ -0.58
CAPN3-203ENST00000349748 ARFIP2P53365 341 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 NEXNQ0ZGT2 675 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 PPP2R5CQ13362 524 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 RPS6KA1Q15418 735 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 VPS72Q15906 364 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 MIIPQ5JXC2 388 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 C6orf183Q5T699 404 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 KLHL35Q6PF15 583 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 RFX8Q6ZV50 586 aa11.44□□□□□ -0.58
CAPN3-203ENST00000349748 DNAAF5Q86Y56 855 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms