RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 TRIM68Q6AZZ1 485 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 ALKBH5Q6P6C2 394 aaKnown RBP20.16■□□□□ 0.82
SCARF1-202ENST00000348987 CERS5Q8N5B7 392 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 CCDC134Q9H6E4 229 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 RIC8AQ9NPQ8 531 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 ZDHHC18Q9NUE0 388 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 ZFATQ9P243 1243 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 DDX25Q9UHL0 483 aaKnown RBP20.16■□□□□ 0.82
SCARF1-202ENST00000348987 MYBL1P10243 752 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 ATP4AP20648 1035 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 PDE6CP51160 858 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 ZNF131P52739 623 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 ZNF543Q08ER8 600 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 BNIP1Q12981 228 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 PDIA5Q14554 519 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 TMEM119Q4V9L6 283 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 CCDC38Q502W7 563 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 ASPRV1Q53RT3 343 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 IRF2BP2Q7Z5L9 587 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 GLG1Q92896 1179 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 RBM17Q96I25 401 aaKnown RBP20.16■□□□□ 0.82
SCARF1-202ENST00000348987 ARHGEF3Q9NR81 526 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 FGFR1OP2Q9NVK5 253 aa20.16■□□□□ 0.82
SCARF1-202ENST00000348987 TRPC5Q9UL62 973 aaPredicted RBP20.16■□□□□ 0.82
SCARF1-202ENST00000348987 USP15Q9Y4E8 981 aaPredicted RBP20.16■□□□□ 0.82
SCARF1-202ENST00000348987 SCNN1DP51172 638 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 COASYQ13057 564 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 SPDYCQ5MJ68 293 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 CERKQ8TCT0 537 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 EPS8L3Q8TE67 593 aaKnown RBP20.15■□□□□ 0.82
SCARF1-202ENST00000348987 NAF1Q96HR8 494 aaKnown RBP20.15■□□□□ 0.82
SCARF1-202ENST00000348987 RAB17Q9H0T7 212 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 CPSF2Q9P2I0 782 aaKnown RBP20.15■□□□□ 0.82
SCARF1-202ENST00000348987 IGKV6D-41A0A0C4DH26 115 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 GOLGA6L10A0A0M3HER8 536 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 USP17L15C9J2P7 530 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 USP17L13C9JLJ4 530 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 USP17L11C9JVI0 530 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 USP17L18D6R9N7 530 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 USP17L22D6RA61 530 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 USP17L17D6RBQ6 530 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 USP17L19D6RCP7 530 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 USP17L20D6RJB6 530 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 E9PMD0 336 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 USP17L24Q0WX57 530 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 PRPF4BQ13523 1007 aaKnown RBP20.15■□□□□ 0.82
SCARF1-202ENST00000348987 USP17L6PQ6QN14 398 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 NELFCDQ8IXH7 590 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 MYOCDQ8IZQ8 938 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 MGARPQ8TDB4 240 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 GANQ9H2C0 597 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 STXBP5LQ9Y2K9 1186 aa20.15■□□□□ 0.82
SCARF1-202ENST00000348987 POLRMTO00411 1230 aaKnown RBP20.14■□□□□ 0.82
SCARF1-202ENST00000348987 RAD21O60216 631 aa20.14■□□□□ 0.82
SCARF1-202ENST00000348987 OAS1P00973 400 aaKnown RBP20.14■□□□□ 0.82
SCARF1-202ENST00000348987 ATP11AP98196 1134 aa20.14■□□□□ 0.82
SCARF1-202ENST00000348987 DR1Q01658 176 aa20.14■□□□□ 0.82
SCARF1-202ENST00000348987 ORC2Q13416 577 aaPredicted RBP20.14■□□□□ 0.82
SCARF1-202ENST00000348987 CNGA2Q16280 664 aa20.14■□□□□ 0.82
SCARF1-202ENST00000348987 ZCWPW2Q504Y3 356 aa20.14■□□□□ 0.82
SCARF1-202ENST00000348987 C10orf76Q5T2E6 689 aa20.14■□□□□ 0.82
SCARF1-202ENST00000348987 FAM43BQ6ZT52 329 aaPredicted RBP20.14■□□□□ 0.82
SCARF1-202ENST00000348987 FBXO25Q8TCJ0 367 aa20.14■□□□□ 0.82
SCARF1-202ENST00000348987 SEMA4AQ9H3S1 761 aa20.14■□□□□ 0.82
SCARF1-202ENST00000348987 DBR1Q9UK59 544 aaKnown RBP20.14■□□□□ 0.82
SCARF1-202ENST00000348987 SNX24Q9Y343 169 aa20.14■□□□□ 0.82
SCARF1-202ENST00000348987 PNMA6FA0A0J9YX94 578 aa20.14■□□□□ 0.81
SCARF1-202ENST00000348987 LUC7L3O95232 432 aaKnown RBP20.14■□□□□ 0.81
SCARF1-202ENST00000348987 CTCFP49711 727 aaPredicted RBP20.14■□□□□ 0.81
SCARF1-202ENST00000348987 KLRC3Q07444 240 aa20.14■□□□□ 0.81
SCARF1-202ENST00000348987 MKRN4PQ13434 485 aaPredicted RBP20.14■□□□□ 0.81
SCARF1-202ENST00000348987 GNPTABQ3T906 1256 aa20.14■□□□□ 0.81
SCARF1-202ENST00000348987 NT5DC3Q86UY8 548 aa20.14■□□□□ 0.81
SCARF1-202ENST00000348987 ERP44Q9BS26 406 aa20.14■□□□□ 0.81
SCARF1-202ENST00000348987 RAB34Q9BZG1 259 aa20.14■□□□□ 0.81
SCARF1-202ENST00000348987 SUCLA2Q9P2R7 463 aaPredicted RBP20.14■□□□□ 0.81
SCARF1-202ENST00000348987 DPPA5A6NC42 116 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 FAM196BA6NMK8 535 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 TCP11X1B4DZS4 312 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 MPHOSPH10O00566 681 aaKnown RBP20.13■□□□□ 0.81
SCARF1-202ENST00000348987 TTLL1O95922 423 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 AGTP01019 485 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 FESP07332 822 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 SHMT1P34896 483 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 EPS15P42566 896 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 CLK2P49760 499 aaKnown RBP20.13■□□□□ 0.81
SCARF1-202ENST00000348987 RAB27AP51159 221 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 LACTBP83111 547 aaPredicted RBP20.13■□□□□ 0.81
SCARF1-202ENST00000348987 DUPD1Q68J44 220 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 SLC30A9Q6PML9 568 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 TRIM59Q8IWR1 403 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 FITM2Q8N6M3 262 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 DYDC1Q8WWB3 177 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 KCNQ5Q9NR82 932 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 SERPINB13Q9UIV8 391 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 PCDHA12Q9UN75 941 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 DAAM1Q9Y4D1 1078 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 ONECUT3O60422 494 aaPredicted RBP20.13■□□□□ 0.81
SCARF1-202ENST00000348987 SEPT2Q15019 361 aa20.13■□□□□ 0.81
SCARF1-202ENST00000348987 C6orf118Q5T5N4 469 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms