RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 NBPF15Q8N660 670 aa12.59□□□□□ -0.39
TRAF3-201ENST00000347662 KMT5AQ9NQR1 393 aa12.59□□□□□ -0.39
TRAF3-201ENST00000347662 DIABLOQ9NR28 239 aa12.59□□□□□ -0.39
TRAF3-201ENST00000347662 SOS2Q07890 1332 aaPredicted RBP12.58□□□□□ -0.4
TRAF3-201ENST00000347662 KDM2BQ8NHM5 1336 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 GADD45BO75293 160 aaPredicted RBP12.58□□□□□ -0.4
TRAF3-201ENST00000347662 DAB1O75553 588 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 TRIM71Q2Q1W2 868 aaKnown RBP12.58□□□□□ -0.4
TRAF3-201ENST00000347662 SYDE2Q5VT97 1194 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 CRLF3Q8IUI8 442 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 TEX2Q8IWB9 1127 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.58□□□□□ -0.4
TRAF3-201ENST00000347662 ADA2Q9NZK5 511 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 MEIS1O00470 390 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 CCT5P48643 541 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 CDK8P49336 464 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 ADAM9Q13443 819 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 NFIXQ14938 502 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 C10orf76Q5T2E6 689 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 SH3BP5LQ7L8J4 393 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 NT5C1BQ96P26 610 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 FAM49AQ9H0Q0 323 aaPredicted RBP12.58□□□□□ -0.4
TRAF3-201ENST00000347662 TMEM245Q9H330 911 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 PARVGQ9HBI0 331 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 IMPACTQ9P2X3 320 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 CARMIL3Q8ND23 1372 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 DEUP1Q05D60 604 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 DNAJC24Q6P3W2 148 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 RGS9BPQ6ZS82 235 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 ARMCX2Q7L311 632 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 PCIF1Q9H4Z3 704 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 ADCY9O60503 1353 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 CSE1LP55060 971 aaKnown RBP12.58□□□□□ -0.4
TRAF3-201ENST00000347662 TAS2R42Q7RTR8 314 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 OSBP2Q969R2 916 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 VPS39Q96JC1 886 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 ZNF215Q9UL58 517 aaPredicted RBP12.58□□□□□ -0.4
TRAF3-201ENST00000347662 ATP8A1Q9Y2Q0 1164 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 TNS3Q68CZ2 1445 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 UBA6A0AVT1 1052 aaPredicted RBP12.58□□□□□ -0.4
TRAF3-201ENST00000347662 DDHD2O94830 711 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 CAPN1P07384 714 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 MTERF2Q49AM1 385 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 ZC3H18Q86VM9 953 aaKnown RBP12.58□□□□□ -0.4
TRAF3-201ENST00000347662 C17orf53Q8N3J3 647 aaPredicted RBP12.58□□□□□ -0.4
TRAF3-201ENST00000347662 CD209Q9NNX6 404 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 SCAF8Q9UPN6 1271 aaKnown RBP12.58□□□□□ -0.4
TRAF3-201ENST00000347662 RPN1P04843 607 aaKnown RBP12.58□□□□□ -0.4
TRAF3-201ENST00000347662 PPP3CCP48454 512 aa12.58□□□□□ -0.4
TRAF3-201ENST00000347662 ACTR5Q9H9F9 607 aaPredicted RBP12.58□□□□□ -0.4
TRAF3-201ENST00000347662 RNF103-CHMP3A0A140T963 221 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 BPIFB4P59827 614 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 MORF4L2Q15014 288 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 EFTUD2Q15029 972 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRAF3-201ENST00000347662 UBE2SQ16763 222 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 ALFQ53S48 1182 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 PPARGC1AQ9UBK2 798 aaKnown RBP12.57□□□□□ -0.4
TRAF3-201ENST00000347662 GTF2A1LQ9UNN4 478 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 SPATA31E1Q6ZUB1 1445 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 SPP2Q13103 211 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 ZNF827Q17R98 1081 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 EXOC3L4Q17RC7 722 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 C11orf96Q7Z7L8 435 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 FAF2Q96CS3 445 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 DESI2Q9BSY9 194 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 BCL2L14Q9BZR8 327 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 FHDC1Q9C0D6 1143 aaPredicted RBP12.57□□□□□ -0.4
TRAF3-201ENST00000347662 SPAG7O75391 227 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 ZBED1O96006 694 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 NUDT18Q6ZVK8 323 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 CEP170P1Q96L14 293 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 GINM1Q9NU53 330 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 PCDHA5Q9Y5H7 936 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 A2ML1A8K2U0 1454 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 CYP19A1P11511 503 aaPredicted RBP12.57□□□□□ -0.4
TRAF3-201ENST00000347662 SLC16A1P53985 500 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 NLRP4Q96MN2 994 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 ZSWIM5Q9P217 1185 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 COBLO75128 1261 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 PSMA3P25788 255 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 PDXDC2PQ6P474 469 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 DEPDC7Q96QD5 511 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 MYCBPQ99417 103 aaPredicted RBP12.57□□□□□ -0.4
TRAF3-201ENST00000347662 PIH1D3Q9NQM4 214 aaKnown RBP12.57□□□□□ -0.4
TRAF3-201ENST00000347662 C5orf58C9J3I9 102 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 PDIA3P30101 505 aaKnown RBP12.57□□□□□ -0.4
TRAF3-201ENST00000347662 CACNB1Q02641 598 aaPredicted RBP12.57□□□□□ -0.4
TRAF3-201ENST00000347662 ACAD11Q709F0 780 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 DEFB132Q7Z7B7 95 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 C10orf53Q8N6V4 93 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 USP28Q96RU2 1077 aa12.57□□□□□ -0.4
TRAF3-201ENST00000347662 CCHCR1Q8TD31 782 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 CBX8Q9HC52 389 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 SAMSN1Q9NSI8 373 aaKnown RBP12.56□□□□□ -0.4
TRAF3-201ENST00000347662 KIAA1468Q9P260 1216 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 CEP152O94986 1710 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 SUPT3HO75486 399 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 CYP21A2P08686 494 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 SCRN1Q12765 414 aa12.56□□□□□ -0.4
TRAF3-201ENST00000347662 MCTP2Q6DN12 878 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms