RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 TRIM59Q8IWR1 403 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 LRRC8AQ8IWT6 810 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 C12orf56Q8IXR9 622 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 OR6J1Q8NGC5 347 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 SLC7A3Q8WY07 619 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 TMEM143Q96AN5 459 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 HVCN1Q96D96 273 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 POLR3FQ9H1D9 316 aaPredicted RBP12.07□□□□□ -0.48
ECM1-201ENST00000346569 KMT5AQ9NQR1 393 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 AGPAT3Q9NRZ7 376 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 RNF186Q9NXI6 227 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 ARHGAP28Q9P2N2 729 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 FAM184BQ9ULE4 1060 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 TBX20Q9UMR3 447 aa12.07□□□□□ -0.48
ECM1-201ENST00000346569 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.07□□□□□ -0.48
ECM1-201ENST00000346569 ITIH6Q6UXX5 1313 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 ADGRA3Q8IWK6 1321 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 CCDC169A6NNP5 214 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 GAS2O43903 313 aaKnown RBP12.06□□□□□ -0.48
ECM1-201ENST00000346569 TRPA1O75762 1119 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 AKAP3O75969 853 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 NR3C1P04150 777 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 MMP3P08254 477 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 INSRRP14616 1297 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 GLRA2P23416 452 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 CASP4P49662 377 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 FLT3LGP49771 235 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 UBXN1Q04323 297 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 TBC1D8BQ0IIM8 1120 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 DMP1Q13316 513 aaPredicted RBP12.06□□□□□ -0.48
ECM1-201ENST00000346569 MAN2A1Q16706 1144 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 VWA3BQ502W6 1294 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 ARMCX5Q6P1M9 558 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 TAS1R3Q7RTX0 852 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 FRMD5Q7Z6J6 570 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 MAP4K3Q8IVH8 894 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 TRPV1Q8NER1 839 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 GOLGA5Q8TBA6 731 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 ASAP3Q8TDY4 903 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 IFT74Q96LB3 600 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 ERGIC2Q96RQ1 377 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 NOC4LQ9BVI4 516 aaKnown RBP12.06□□□□□ -0.48
ECM1-201ENST00000346569 NDST4Q9H3R1 872 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 ZKSCAN5Q9Y2L8 839 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 MYH11P35749 1972 aa12.06□□□□□ -0.48
ECM1-201ENST00000346569 DENND3A2RUS2 1198 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 H3BRB1 525 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 SLC16A3O15427 465 aaKnown RBP12.05□□□□□ -0.48
ECM1-201ENST00000346569 PRKCSHP14314 528 aaPredicted RBP12.05□□□□□ -0.48
ECM1-201ENST00000346569 SCP2P22307 547 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 ABCD1P33897 745 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 NAMPTP43490 491 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 LBX1P52954 281 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 DRP2Q13474 957 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 DGKDQ16760 1214 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 CEP135Q66GS9 1140 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 HS2ST1Q7LGA3 356 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 ZSCAN30Q86W11 494 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 SYCP3Q8IZU3 236 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 LINC01465Q8N7H1 131 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 JPH2Q9BR39 696 aaPredicted RBP12.05□□□□□ -0.48
ECM1-201ENST00000346569 MKNK1Q9BUB5 465 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 TMX1Q9H3N1 280 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 TUT1Q9H6E5 874 aaKnown RBP12.05□□□□□ -0.48
ECM1-201ENST00000346569 ARID2Q68CP9 1835 aa12.05□□□□□ -0.48
ECM1-201ENST00000346569 ESPNB1AK53 854 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 ANKRD63C9JTQ0 380 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 H0YCG3 227 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 ADSSP30520 456 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 PRKCZQ05513 592 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 LRMPQ12912 555 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 PPP2R5AQ15172 486 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 CCDC40Q4G0X9 1142 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 TC2NQ8N9U0 490 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 TRAPPC12Q8WVT3 735 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 TCP11Q8WWU5 503 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 PRPF31Q8WWY3 499 aaKnown RBP12.04□□□□□ -0.48
ECM1-201ENST00000346569 TRIB2Q92519 343 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 KAT2BQ92831 832 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 KIFC3Q9BVG8 833 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 TMEM134Q9H6X4 195 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 METTL14Q9HCE5 456 aaKnown RBP12.04□□□□□ -0.48
ECM1-201ENST00000346569 COL1A2P08123 1366 aa12.04□□□□□ -0.48
ECM1-201ENST00000346569 MGAMO43451 1857 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 TISP43B9A030 160 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 RNF225M0QZC1 329 aaPredicted RBP12.03□□□□□ -0.48
ECM1-201ENST00000346569 HAS3O00219 553 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 MAPK13O15264 365 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 MAGEB2O15479 319 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 ASAP2O43150 1006 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 ADCY3O60266 1144 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 DUSP11O75319 330 aaKnown RBP12.03□□□□□ -0.48
ECM1-201ENST00000346569 C22orf31O95567 290 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 TPM2P07951 284 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 CYBAP13498 195 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 KLRC1P26715 233 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 CNGA1P29973 690 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 PSMC2P35998 433 aaKnown RBP12.03□□□□□ -0.48
ECM1-201ENST00000346569 NKX3-2P78367 333 aa12.03□□□□□ -0.48
ECM1-201ENST00000346569 IRX5P78411 483 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms