RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 RNF146Q9NTX7 359 aa24.64■■□□□ 1.54
NPAS3-201ENST00000346562 MYBL1P10243 752 aa24.64■■□□□ 1.54
NPAS3-201ENST00000346562 TEX2Q8IWB9 1127 aa24.64■■□□□ 1.54
NPAS3-201ENST00000346562 GTSE1Q9NYZ3 720 aa24.64■■□□□ 1.54
NPAS3-201ENST00000346562 SUFUQ9UMX1 484 aa24.64■■□□□ 1.54
NPAS3-201ENST00000346562 DISP1Q96F81 1524 aa24.64■■□□□ 1.54
NPAS3-201ENST00000346562 CEP170Q5SW79 1584 aa24.64■■□□□ 1.54
NPAS3-201ENST00000346562 ACSL3O95573 720 aa24.64■■□□□ 1.53
NPAS3-201ENST00000346562 SKIP12755 728 aa24.64■■□□□ 1.53
NPAS3-201ENST00000346562 NR1H3Q13133 447 aa24.64■■□□□ 1.53
NPAS3-201ENST00000346562 RASSF3Q86WH2 238 aa24.64■■□□□ 1.53
NPAS3-201ENST00000346562 SPATA17Q96L03 361 aa24.64■■□□□ 1.53
NPAS3-201ENST00000346562 MDM2Q00987 491 aaPredicted RBP24.64■■□□□ 1.53
NPAS3-201ENST00000346562 ASIC4Q96FT7 647 aa24.64■■□□□ 1.53
NPAS3-201ENST00000346562 DYDC2Q96IM9 177 aa24.64■■□□□ 1.53
NPAS3-201ENST00000346562 MRPL4Q9BYD3 311 aaKnown RBP24.64■■□□□ 1.53
NPAS3-201ENST00000346562 EFHC2Q5JST6 749 aa24.64■■□□□ 1.53
NPAS3-201ENST00000346562 YAF2Q8IY57 180 aa24.64■■□□□ 1.53
NPAS3-201ENST00000346562 PIP4K2CQ8TBX8 421 aa24.64■■□□□ 1.53
NPAS3-201ENST00000346562 TRIM33Q9UPN9 1127 aa24.64■■□□□ 1.53
NPAS3-201ENST00000346562 NUDT18Q6ZVK8 323 aa24.63■■□□□ 1.53
NPAS3-201ENST00000346562 APOBEC2Q9Y235 224 aaKnown RBP24.63■■□□□ 1.53
NPAS3-201ENST00000346562 STK36Q9NRP7 1315 aa24.63■■□□□ 1.53
NPAS3-201ENST00000346562 FCER1AP12319 257 aa24.63■■□□□ 1.53
NPAS3-201ENST00000346562 NAALADL2Q58DX5 795 aa24.63■■□□□ 1.53
NPAS3-201ENST00000346562 PODNQ7Z5L7 613 aa24.63■■□□□ 1.53
NPAS3-201ENST00000346562 CTIFO43310 598 aaKnown RBP24.63■■□□□ 1.53
NPAS3-201ENST00000346562 MFAP3LO75121 409 aa24.63■■□□□ 1.53
NPAS3-201ENST00000346562 RAD51Q06609 339 aa24.63■■□□□ 1.53
NPAS3-201ENST00000346562 SYT2Q8N9I0 419 aaPredicted RBP24.63■■□□□ 1.53
NPAS3-201ENST00000346562 MTBPQ96DY7 904 aa24.63■■□□□ 1.53
NPAS3-201ENST00000346562 DDX50Q9BQ39 737 aaKnown RBP24.63■■□□□ 1.53
NPAS3-201ENST00000346562 SLC16A4O15374 487 aa24.63■■□□□ 1.53
NPAS3-201ENST00000346562 MYO1DO94832 1006 aa24.63■■□□□ 1.53
NPAS3-201ENST00000346562 DYRK4Q9NR20 520 aa24.63■■□□□ 1.53
NPAS3-201ENST00000346562 MAP3K20Q9NYL2 800 aaKnown RBP24.63■■□□□ 1.53
NPAS3-201ENST00000346562 TTC17Q96AE7 1141 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 POLR3FQ9H1D9 316 aaPredicted RBP24.62■■□□□ 1.53
NPAS3-201ENST00000346562 IP6K2Q9UHH9 426 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 CAPN11Q9UMQ6 739 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 UTYO14607 1347 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 NCAPD2Q15021 1401 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 E2F6O75461 281 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 SASH1O94885 1247 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 ZRANB2O95218 330 aaKnown RBP eCLIP24.62■■□□□ 1.53
NPAS3-201ENST00000346562 RALAP11233 206 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 DDX5P17844 614 aaKnown RBP24.62■■□□□ 1.53
NPAS3-201ENST00000346562 VEPH1Q14D04 833 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 PASD1Q8IV76 773 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 EFHBQ8N7U6 833 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 SH3KBP1Q96B97 665 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 STRBPQ96SI9 672 aaKnown RBP24.62■■□□□ 1.53
NPAS3-201ENST00000346562 CDC42BPGQ6DT37 1551 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 P4HBP07237 508 aaKnown RBP24.62■■□□□ 1.53
NPAS3-201ENST00000346562 FOXD4Q12950 439 aaPredicted RBP24.62■■□□□ 1.53
NPAS3-201ENST00000346562 LBRQ14739 615 aaKnown RBP24.62■■□□□ 1.53
NPAS3-201ENST00000346562 RAB42Q8N4Z0 105 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 SPATA33Q96N06 139 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 SLC7A5P2Q9GIP4 190 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 DDX56Q9NY93 547 aaKnown RBP24.62■■□□□ 1.53
NPAS3-201ENST00000346562 HEY1Q9Y5J3 304 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 CACNB3P54284 484 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 CDKL3Q8IVW4 592 aaPredicted RBP24.62■■□□□ 1.53
NPAS3-201ENST00000346562 MCAMP43121 646 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 AP3M2P53677 418 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 ACCSLQ4AC99 568 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 TEKT4Q8WW24 435 aa24.62■■□□□ 1.53
NPAS3-201ENST00000346562 ARHGEF5Q12774 1597 aa24.61■■□□□ 1.53
NPAS3-201ENST00000346562 PI4K2BG5E9Z4 385 aa24.61■■□□□ 1.53
NPAS3-201ENST00000346562 ADAMTS1Q9UHI8 967 aa24.61■■□□□ 1.53
NPAS3-201ENST00000346562 KCNA1Q09470 495 aa24.61■■□□□ 1.53
NPAS3-201ENST00000346562 TMEM60Q9H2L4 133 aa24.61■■□□□ 1.53
NPAS3-201ENST00000346562 ACAD9Q9H845 621 aa24.61■■□□□ 1.53
NPAS3-201ENST00000346562 H7C1W4 665 aa24.61■■□□□ 1.53
NPAS3-201ENST00000346562 LMNAP02545 664 aaKnown RBP24.61■■□□□ 1.53
NPAS3-201ENST00000346562 TEDDM1Q5T9Z0 273 aa24.61■■□□□ 1.53
NPAS3-201ENST00000346562 TMEM47Q9BQJ4 181 aa24.61■■□□□ 1.53
NPAS3-201ENST00000346562 KCNH4Q9UQ05 1017 aa24.61■■□□□ 1.53
NPAS3-201ENST00000346562 SPAG7O75391 227 aa24.61■■□□□ 1.53
NPAS3-201ENST00000346562 FDX1P10109 184 aa24.61■■□□□ 1.53
NPAS3-201ENST00000346562 TDRD3Q9H7E2 651 aaKnown RBP24.61■■□□□ 1.53
NPAS3-201ENST00000346562 DNAJC17Q9NVM6 304 aaKnown RBP24.61■■□□□ 1.53
NPAS3-201ENST00000346562 NARFQ9UHQ1 456 aa24.61■■□□□ 1.53
NPAS3-201ENST00000346562 SYNE4Q8N205 404 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 ZNF560Q96MR9 790 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 ASB14A6NK59 587 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 MCF2P10911 925 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 GCLMP48507 274 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 HEATR6Q6AI08 1181 aaKnown RBP24.6■■□□□ 1.53
NPAS3-201ENST00000346562 PALMO75781 387 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 CYP27A1Q02318 531 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 EMBQ6PCB8 327 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 PBXIP1Q96AQ6 731 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 TRIM54Q9BYV2 358 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 CPB1P15086 417 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 ADRA2BP18089 450 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 SLC7A5Q01650 507 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 DCAF4L1Q3SXM0 396 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 ACBD5Q5T8D3 534 aaPredicted RBP24.6■■□□□ 1.53
NPAS3-201ENST00000346562 EGFL8Q99944 293 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms