RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 FERMT3Q86UX7 667 aa17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 ZNF579Q8NAF0 562 aaKnown RBP17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 RNF149Q8NC42 400 aa17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 SNX29Q8TEQ0 813 aa17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 GDPD5Q8WTR4 605 aa17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 C17orf80Q9BSJ5 609 aa17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 C11orf84Q9BUA3 381 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 PIN4Q9Y237 131 aaKnown RBP17.54■□□□□ 0.4
TSPAN4-201ENST00000346501 ZBTB39O15060 712 aa17.53■□□□□ 0.4
TSPAN4-201ENST00000346501 MGEA5O60502 916 aa17.53■□□□□ 0.4
TSPAN4-201ENST00000346501 USO1O60763 962 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-201ENST00000346501 MED24O75448 989 aa17.53■□□□□ 0.4
TSPAN4-201ENST00000346501 SPATA31C1P0DKV0 1188 aa17.53■□□□□ 0.4
TSPAN4-201ENST00000346501 GPM6BQ13491 265 aa17.53■□□□□ 0.4
TSPAN4-201ENST00000346501 PAN2Q504Q3 1202 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-201ENST00000346501 KSR1Q8IVT5 923 aa17.53■□□□□ 0.4
TSPAN4-201ENST00000346501 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.53■□□□□ 0.4
TSPAN4-201ENST00000346501 RNF169Q8NCN4 708 aa17.53■□□□□ 0.4
TSPAN4-201ENST00000346501 RSPH1Q8WYR4 309 aa17.53■□□□□ 0.4
TSPAN4-201ENST00000346501 ZNF689Q96CS4 500 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-201ENST00000346501 PLVAPQ9BX97 442 aa17.53■□□□□ 0.4
TSPAN4-201ENST00000346501 MTCH2Q9Y6C9 303 aa17.53■□□□□ 0.4
TSPAN4-201ENST00000346501 COL4A6Q14031 1691 aa17.52■□□□□ 0.4
TSPAN4-201ENST00000346501 TBKBP1A7MCY6 615 aa17.52■□□□□ 0.4
TSPAN4-201ENST00000346501 EOMESO95936 686 aa17.52■□□□□ 0.4
TSPAN4-201ENST00000346501 FGFR4P22455 802 aa17.52■□□□□ 0.4
TSPAN4-201ENST00000346501 BMPR1AP36894 532 aa17.52■□□□□ 0.4
TSPAN4-201ENST00000346501 RAB27AP51159 221 aa17.52■□□□□ 0.4
TSPAN4-201ENST00000346501 POU5F1BQ06416 359 aa17.52■□□□□ 0.4
TSPAN4-201ENST00000346501 DSC3Q14574 896 aa17.52■□□□□ 0.4
TSPAN4-201ENST00000346501 NAALADL2Q58DX5 795 aa17.52■□□□□ 0.4
TSPAN4-201ENST00000346501 ARL6IP4Q66PJ3 421 aaKnown RBP17.52■□□□□ 0.4
TSPAN4-201ENST00000346501 POTEGQ6S5H5 508 aa17.52■□□□□ 0.4
TSPAN4-201ENST00000346501 C4orf32Q8N8J7 132 aa17.52■□□□□ 0.4
TSPAN4-201ENST00000346501 CDK5RAP3Q96JB5 506 aa17.52■□□□□ 0.4
TSPAN4-201ENST00000346501 DNM3Q9UQ16 869 aa17.52■□□□□ 0.4
TSPAN4-201ENST00000346501 PCDHB12Q9Y5F1 795 aa17.52■□□□□ 0.4
TSPAN4-201ENST00000346501 A0A0U1RQF3 1178 aa17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 EPOPA6NHQ4 379 aa17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 H3BNC9 293 aa17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 CSDE1O75534 798 aaKnown RBP17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 PDIA4P13667 645 aaKnown RBP17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 FAM189BP81408 668 aa17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 ATP2C1P98194 919 aaPredicted RBP17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 CSPP1Q1MSJ5 1256 aa17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 ECHDC2Q86YB7 292 aa17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 KCTD17Q8N5Z5 321 aa17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 IGSF22Q8N9C0 903 aa17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 CLP1Q92989 425 aaKnown RBP17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 SNX21Q969T3 373 aa17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 PGBD4Q96DM1 585 aa17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 TMEM117Q9H0C3 514 aa17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 KIAA1024Q9UPX6 916 aa17.51■□□□□ 0.39
TSPAN4-201ENST00000346501 INO80B-WBP1J3KQ70 363 aa17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 AXLP30530 894 aa17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 PPP2R5AQ15172 486 aa17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 AAK1Q2M2I8 961 aa17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 TIGD5Q53EQ6 642 aa17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 FAM102BQ5T8I3 360 aa17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 PADI6Q6TGC4 694 aa17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 MAEAQ7L5Y9 396 aa17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 ZBTB8OSQ8IWT0 167 aa17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 MRPL38Q96DV4 380 aaKnown RBP17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 NT5C3AQ9H0P0 336 aa17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 LMAN2LQ9H0V9 348 aa17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 POLR3FQ9H1D9 316 aaPredicted RBP17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 RC3H2Q9HBD1 1191 aaKnown RBP17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 IFT122Q9HBG6 1241 aa17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 XPNPEP1Q9NQW7 623 aa17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 DDX19AQ9NUU7 478 aaKnown RBP17.5■□□□□ 0.39
TSPAN4-201ENST00000346501 CARNS1A5YM72 827 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 VWA3AA6NCI4 1184 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 LRRIQ4A6NIV6 560 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 C5orf67F2Z3F1 127 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 CYP11B2P19099 503 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 ARL2P36404 184 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 ZRSR1Q15695 479 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 SPRED2Q7Z698 418 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 HACE1Q8IYU2 909 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 CRIPAKQ8N1N5 446 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 CNNM3Q8NE01 707 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 RASSF8Q8NHQ8 419 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 P2RX5Q93086 422 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 PPP2R3CQ969Q6 453 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 IFT74Q96LB3 600 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 AK8Q96MA6 479 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 TRAIPQ9BWF2 469 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 MRPL9Q9BYD2 267 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 BHMT2Q9H2M3 363 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 FOXD4L1Q9NU39 408 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 AGPAT5Q9NUQ2 364 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 THEGQ9P2T0 379 aa17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 MRPL42Q9Y6G3 142 aaKnown RBP17.49■□□□□ 0.39
TSPAN4-201ENST00000346501 A0A087WWV3 80 aa17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 RBAK-RBAKDNI3L0D1 243 aa17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 FGFR1P11362 822 aa17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 LAG3P18627 525 aa17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 SYT1P21579 422 aa17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 PTENP60484 403 aa17.48■□□□□ 0.39
TSPAN4-201ENST00000346501 TMEM132AQ24JP5 1023 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms