RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 LONP1P36776 959 aaKnown RBP15.34■□□□□ 0.05
TPM4-202ENST00000344824 CRYBB1P53674 252 aaPredicted RBP15.34■□□□□ 0.05
TPM4-202ENST00000344824 MKRN4PQ13434 485 aaPredicted RBP15.34■□□□□ 0.05
TPM4-202ENST00000344824 ZRSR1Q15695 479 aaKnown RBP15.34■□□□□ 0.05
TPM4-202ENST00000344824 ODR4Q5SWX8 454 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 RESP18Q5W5W9 173 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 OTUD6AQ7L8S5 288 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 RHPN2Q8IUC4 686 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 C4orf19Q8IY42 314 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 LINC01465Q8N7H1 131 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 NEK9Q8TD19 979 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 JPH2Q9BR39 696 aaPredicted RBP15.34■□□□□ 0.05
TPM4-202ENST00000344824 FTHL17Q9BXU8 183 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 INSL6Q9Y581 213 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 SQORQ9Y6N5 450 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 TRANK1O15050 2925 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 ZBTB39O15060 712 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 GPR32O75388 356 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 FGFR4P22455 802 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.052e-7■□□□□ 10.7
TPM4-202ENST00000344824 GPC3P51654 580 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 NDUFA8P51970 172 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 FAM228AQ86W67 206 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 ZNF579Q8NAF0 562 aaKnown RBP15.34■□□□□ 0.05
TPM4-202ENST00000344824 RASSF8Q8NHQ8 419 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 GDPD5Q8WTR4 605 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 TOP1MTQ969P6 601 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 NLRP4Q96MN2 994 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 PANK2Q9BZ23 570 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 RAB34Q9BZG1 259 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 ERVK-5Q9HDB9 667 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 SUCLA2Q9P2R7 463 aaPredicted RBP15.34■□□□□ 0.05
TPM4-202ENST00000344824 LRWD1Q9UFC0 647 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 LRFN2Q9ULH4 789 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 ST3GAL5Q9UNP4 418 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 A0A087WWV3 80 aa15.33■□□□□ 0.04
TPM4-202ENST00000344824 LINC01553A4QN01 128 aa15.33■□□□□ 0.04
TPM4-202ENST00000344824 ENPP3O14638 875 aa15.33■□□□□ 0.04
TPM4-202ENST00000344824 GPR182O15218 404 aa15.33■□□□□ 0.04
TPM4-202ENST00000344824 MAFO75444 373 aaPredicted RBP15.33■□□□□ 0.04
TPM4-202ENST00000344824 NR1I2O75469 434 aa15.33■□□□□ 0.04
TPM4-202ENST00000344824 SLITRK3O94933 977 aa15.33■□□□□ 0.04
TPM4-202ENST00000344824 EMC2Q15006 297 aa15.33■□□□□ 0.04
TPM4-202ENST00000344824 PDILTQ8N807 584 aa15.33■□□□□ 0.04
TPM4-202ENST00000344824 ERMNQ8TAM6 284 aa15.33■□□□□ 0.04
TPM4-202ENST00000344824 PIGOQ8TEQ8 1089 aa15.33■□□□□ 0.04
TPM4-202ENST00000344824 TMEM143Q96AN5 459 aa15.33■□□□□ 0.04
TPM4-202ENST00000344824 TGS1Q96RS0 853 aaKnown RBP15.33■□□□□ 0.04
TPM4-202ENST00000344824 PLIN2Q99541 437 aa15.33■□□□□ 0.04
TPM4-202ENST00000344824 TMX1Q9H3N1 280 aa15.33■□□□□ 0.04
TPM4-202ENST00000344824 MYH11P35749 1972 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 A0A087WZ62 844 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 EPOPA6NHQ4 379 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 MGEA5O60502 916 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 USO1O60763 962 aaKnown RBP15.32■□□□□ 0.04
TPM4-202ENST00000344824 CSDE1O75534 798 aaKnown RBP15.32■□□□□ 0.04
TPM4-202ENST00000344824 TXLNAP40222 546 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 RFC5P40937 340 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 UBA7P41226 1012 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 SYKP43405 635 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 ADGRE1Q14246 886 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 CCDC85BQ15834 202 aaPredicted RBP15.32■□□□□ 0.04
TPM4-202ENST00000344824 SKOR2Q2VWA4 1001 aaPredicted RBP15.32■□□□□ 0.04
TPM4-202ENST00000344824 PAN2Q504Q3 1202 aaKnown RBP15.32■□□□□ 0.04
TPM4-202ENST00000344824 CAVIN1Q6NZI2 390 aaKnown RBP15.32■□□□□ 0.04
TPM4-202ENST00000344824 CABP7Q86V35 215 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 IGSF22Q8N9C0 903 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 CEP89Q96ST8 783 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 MTRQ99707 1265 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 ADAM2Q99965 735 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 FDXACB1Q9BRP7 624 aaPredicted RBP15.32■□□□□ 0.04
TPM4-202ENST00000344824 C17orf80Q9BSJ5 609 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 ADAMTS10Q9H324 1103 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 DACT1Q9NYF0 836 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 KCNH3Q9ULD8 1083 aa15.32■□□□□ 0.04
TPM4-202ENST00000344824 ATG2AQ2TAZ0 1938 aa15.31■□□□□ 0.04
TPM4-202ENST00000344824 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.31■□□□□ 0.04
TPM4-202ENST00000344824 GTPBP6O43824 516 aaPredicted RBP15.31■□□□□ 0.04
TPM4-202ENST00000344824 MED24O75448 989 aa15.31■□□□□ 0.04
TPM4-202ENST00000344824 STAG3L1P0CL83 205 aa15.31■□□□□ 0.04
TPM4-202ENST00000344824 EIF4BP23588 611 aaKnown RBP15.31■□□□□ 0.04
TPM4-202ENST00000344824 HTRA4P83105 476 aaPredicted RBP15.31■□□□□ 0.04
TPM4-202ENST00000344824 FAM160A1Q05DH4 1040 aa15.31■□□□□ 0.04
TPM4-202ENST00000344824 KARSQ15046 597 aaKnown RBP15.31■□□□□ 0.04
TPM4-202ENST00000344824 KLHL40Q2TBA0 621 aa15.31■□□□□ 0.04
TPM4-202ENST00000344824 HAUS3Q68CZ6 603 aa15.31■□□□□ 0.04
TPM4-202ENST00000344824 POTEGQ6S5H5 508 aa15.31■□□□□ 0.04
TPM4-202ENST00000344824 RTN4RL1Q86UN2 441 aaPredicted RBP15.31■□□□□ 0.04
TPM4-202ENST00000344824 KSR1Q8IVT5 923 aa15.31■□□□□ 0.04
TPM4-202ENST00000344824 SNX29Q8TEQ0 813 aa15.31■□□□□ 0.04
TPM4-202ENST00000344824 PSPC1Q8WXF1 523 aaKnown RBP15.31■□□□□ 0.04
TPM4-202ENST00000344824 AK8Q96MA6 479 aa15.31■□□□□ 0.04
TPM4-202ENST00000344824 GCOM2Q9BZD3 368 aaPredicted RBP15.31■□□□□ 0.04
TPM4-202ENST00000344824 TSPYL2Q9H2G4 693 aaPredicted RBP15.31■□□□□ 0.04
TPM4-202ENST00000344824 ATP6V0A4Q9HBG4 840 aa15.31■□□□□ 0.04
TPM4-202ENST00000344824 COL4A3BPQ9Y5P4 624 aa15.31■□□□□ 0.04
TPM4-202ENST00000344824 ADGRA3Q8IWK6 1321 aa15.31■□□□□ 0.04
TPM4-202ENST00000344824 COL4A6Q14031 1691 aa15.3■□□□□ 0.04
TPM4-202ENST00000344824 A0A087X0B3 334 aa15.3■□□□□ 0.04
TPM4-202ENST00000344824 IGKV6-21A0A0C4DH24 114 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms