RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 BBOF1Q8ND07 529 aa17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 FAM163AQ96GL9 167 aaPredicted RBP17.67■□□□□ 0.42
SMARCA4-201ENST00000344626 SERPING1P05155 500 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 PRKCBP05771 671 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 MYBP10242 640 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 MTMR3Q13615 1198 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 MESDQ14696 234 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 AFAP1L2Q8N4X5 818 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 MOV10L1Q9BXT6 1211 aaKnown RBP17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 ZMYND12Q9H0C1 365 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 DONSONQ9NYP3 566 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.66■□□□□ 0.425e-6■□□□□ 10.3
SMARCA4-201ENST00000344626 PPP2R2CQ9Y2T4 447 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 V9GYY5 206 aaPredicted RBP17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 ADAMTSL3P82987 1691 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 ANTXR2P58335 489 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 VEPH1Q14D04 833 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 WHAMMP3Q1A5X7 153 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 C15orf52Q6ZUT6 534 aaKnown RBP17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 RFX6Q8HWS3 928 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 YME1L1Q96TA2 773 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 PRG3Q9Y2Y8 225 aaPredicted RBP17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 NFKBIEO00221 500 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 MAN1A1P33908 653 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 C11orf57Q6ZUT1 292 aaPredicted RBP17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 GPD1LQ8N335 351 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 ABHD16BQ9H3Z7 469 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 GOLGA8FQ08AF8 430 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 GOLGA8DPQ0D2H9 430 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 GEN1Q17RS7 908 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 PLA2G4FQ68DD2 849 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 HAUS6Q7Z4H7 955 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 FAM133AQ8N9E0 248 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 SHCBP1Q8NEM2 672 aa17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 IPO11Q9UI26 975 aaKnown RBP17.66■□□□□ 0.42
SMARCA4-201ENST00000344626 GOLGA8CPA6NN73 597 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 H7C0C1 242 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 SRGAP2BP0DMP2 458 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 ATP5OP48047 213 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 MAGED2Q9UNF1 606 aaPredicted RBP17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 VWA5AO00534 786 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 P3H4Q92791 437 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 WNK4Q96J92 1243 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 SAMSN1Q9NSI8 373 aaKnown RBP17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 CNTNAP5Q8WYK1 1306 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 U2AF2P26368 475 aaKnown RBP eCLIP17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 ERICH1Q86X53 443 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 ANKS4BQ8N8V4 417 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 TMEM169Q96HH4 297 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 ACAP3Q96P50 834 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 CCSER1Q9C0I3 900 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 MAD2L2Q9UI95 211 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 LCMT1Q9UIC8 334 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 SCINQ9Y6U3 715 aa17.65■□□□□ 0.42
SMARCA4-201ENST00000344626 SLIT2O94813 1529 aa17.64■□□□□ 0.42
SMARCA4-201ENST00000344626 OR1G1P47890 313 aa17.64■□□□□ 0.42
SMARCA4-201ENST00000344626 RBL2Q08999 1139 aa17.64■□□□□ 0.42
SMARCA4-201ENST00000344626 AGO2Q9UKV8 859 aaKnown RBP17.64■□□□□ 0.42
SMARCA4-201ENST00000344626 SLURP2P0DP57 97 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 KCNA4P22459 653 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 GBP1P32455 592 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 ADCY8P40145 1251 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 VAMP7P51809 220 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 MXRA7P84157 204 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 PAN2Q504Q3 1202 aaKnown RBP17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 CCDC170Q8IYT3 715 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 GUF1Q8N442 669 aaKnown RBP17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 SAAL1Q96ER3 474 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 MRIQ9BWK5 157 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 PCDHB7Q9Y5E2 793 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 PRPSAP2O60256 369 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 PALM2Q8IXS6 379 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 KRT222Q8N1A0 295 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 DESI2Q9BSY9 194 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 CARD6Q9BX69 1037 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 PHBP35232 272 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 KRT17Q04695 432 aa17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.64■□□□□ 0.41
SMARCA4-201ENST00000344626 SCP2P22307 547 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 ACTR2P61160 394 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 STAG3L1P0CL83 205 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 NPEPPSP55786 919 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 LRRC8AQ8IWT6 810 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 TUBE1Q9UJT0 475 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 ZNF148Q9UQR1 794 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 ERICH4A6NGS2 130 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 YDJCA8MPS7 323 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 ITGA4P13612 1032 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 YAF2Q8IY57 180 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 DEFB118Q96PH6 123 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 RBAKQ9NYW8 714 aaPredicted RBP17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 ALDH7A1P49419 539 aaKnown RBP17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 FLT3LGP49771 235 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 IRX5P78411 483 aaPredicted RBP17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 PTPROQ16827 1216 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 KAZNQ674X7 775 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 RUFY4Q6ZNE9 571 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 ATRIPQ8WXE1 791 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms