RNA–Protein interactions for RNA: ENST00000344100.7

CACNA1C-203, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-203ENST00000344100 PCSK9Q8NBP7 692 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 FAM84BQ96KN1 310 aaPredicted RBP12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 THAP9Q9H5L6 903 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 TMEM260Q9NX78 707 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 RRN3P2A6NIE6 340 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 A6NNZ2 444 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 SEC24BO95487 1268 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 BAATQ14032 418 aaPredicted RBP12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 TUBB8Q3ZCM7 444 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 SYTL3Q4VX76 610 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 FBXO41Q8TF61 875 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 FAF2Q96CS3 445 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 EEF2KMTQ96G04 330 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 ZNF512Q96ME7 567 aaPredicted RBP12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 MFSD1Q9H3U5 465 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 HOMER3Q9NSC5 361 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 MID2Q9UJV3 735 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 FBXL21Q9UKT6 434 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 TCP1P17987 556 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 EHHADHQ08426 723 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 TAF11Q15544 211 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 ARL6IP4Q66PJ3 421 aaKnown RBP12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 PCGF5Q86SE9 256 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 GPD1LQ8N335 351 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 SPZ1Q9BXG8 430 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 ORC6Q9Y5N6 252 aa12.12□□□□□ -0.47
CACNA1C-203ENST00000344100 DFFAO00273 331 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 HOXA2O43364 376 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 RRP9O43818 475 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 NMT2O60551 498 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 RASSF2P50749 326 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 IRX4P78413 519 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 C10orf76Q5T2E6 689 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 TMEM270Q6UE05 265 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 SFR1Q86XK3 245 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 TRIM42Q8IWZ5 723 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 SCYL3Q8IZE3 742 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 AFF4Q9UHB7 1163 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 CYP2C9P11712 490 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 SDC4P31431 198 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 HHIPL2Q6UWX4 724 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 MARCH10Q8NA82 808 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 ZBTB18Q99592 522 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 ISCA1Q9BUE6 129 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 KLC2Q9H0B6 622 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 NDFIP2Q9NV92 336 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 IPPQ9Y573 584 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 CNTNAP4Q9C0A0 1308 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 MANSC4A6NHS7 340 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 H7C4K7 107 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 GCLCP48506 637 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 LRRC63Q05C16 580 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 CDC42EP5Q6NZY7 148 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 TEKT4Q8WW24 435 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 RAD54LQ92698 747 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 STARD7Q9NQZ5 370 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 FANCLQ9NW38 375 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 RWDD2AQ9UIY3 292 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 RGS12O14924 1447 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 C2CD2LO14523 706 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 TAF1BQ53T94 588 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 PASD1Q8IV76 773 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 NSUN7Q8NE18 718 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 LRRC8CQ8TDW0 803 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 SEPT1Q8WYJ6 367 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 DACT3Q96B18 629 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 RBAKQ9NYW8 714 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 TMEM169Q96HH4 297 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 MXD3Q9BW11 206 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 SIK2Q9H0K1 926 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 MUC3BQ9H195 1237 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 YWHABP31946 246 aaKnown RBP12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 KIF23Q02241 960 aaPredicted RBP12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 IMPG1Q17R60 797 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 GPATCH11Q8N954 259 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 CENPKQ9BS16 269 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 CPVLQ9H3G5 476 aa12.11□□□□□ -0.47
CACNA1C-203ENST00000344100 RSPH10B2B2RC85 870 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 RSPH10BP0C881 870 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 HADHAP40939 763 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 PHEXP78562 749 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 LAMC2Q13753 1193 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 SMYD4Q8IYR2 804 aaPredicted RBP12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 UHMK1Q8TAS1 419 aaKnown RBP12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 USH1CQ9Y6N9 552 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 H3BRJ5 948 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 SERPING1P05155 500 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 HMBSP08397 361 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 LZICQ8WZA0 190 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 TRIM54Q9BYV2 358 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 TMEM39BQ9GZU3 492 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 CD4P01730 458 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 CDC25AP30304 524 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 TMEM132BQ14DG7 1078 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 CYP4A22Q5TCH4 519 aa12.1□□□□□ -0.47
CACNA1C-203ENST00000344100 STN1Q9H668 368 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms