RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 XRCC5P13010 732 aaKnown RBP10.44□□□□□ -0.74
HOXA1-201ENST00000343060 GNAZP19086 355 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 ATP11AP98196 1134 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 BMT2Q1RMZ1 405 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 USP17L2Q6R6M4 530 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 PRELID2Q8N945 189 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 ANKLE1Q8NAG6 615 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 SLC44A5Q8NCS7 719 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 MICAL1Q8TDZ2 1067 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 ART4Q93070 314 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 SLC35C1Q96A29 364 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 NIP7Q9Y221 180 aaKnown RBP eCLIP10.44□□□□□ -0.74
HOXA1-201ENST00000343060 LRRC42Q9Y546 428 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 IRS2Q9Y4H2 1338 aa10.44□□□□□ -0.74
HOXA1-201ENST00000343060 SMIM23A6NLE4 172 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 TCP11X1B4DZS4 312 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 PDXKO00764 312 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 EVI5O60447 810 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 HIBADHP31937 336 aaKnown RBP10.43□□□□□ -0.74
HOXA1-201ENST00000343060 HOXD13P35453 343 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 STAT1P42224 750 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 SLC12A3P55017 1021 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 PPP4CP60510 307 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 KNOP1Q1ED39 458 aaKnown RBP10.43□□□□□ -0.74
HOXA1-201ENST00000343060 PARP6Q2NL67 630 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 SPTY2D1Q68D10 685 aaPredicted RBP10.43□□□□□ -0.74
HOXA1-201ENST00000343060 C11orf63Q6NUN7 778 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 C3orf67Q6ZVT6 689 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 TRMT10CQ7L0Y3 403 aaKnown RBP10.43□□□□□ -0.74
HOXA1-201ENST00000343060 CYFIP1Q7L576 1253 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 KIF2BQ8N4N8 673 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 FITM2Q8N6M3 262 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 SERPINB12Q96P63 405 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 CTNNAL1Q9UBT7 734 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 PNMA3Q9UL41 463 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 PFASO15067 1338 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 FRMPD4Q14CM0 1322 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 MIF4GDA9UHW6 222 aaKnown RBP10.43□□□□□ -0.74
HOXA1-201ENST00000343060 E9PMD0 336 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 AKAP3O75969 853 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 UNC5CO95185 931 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 FGFR4P22455 802 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 COPB2P35606 906 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 SOX5P35711 763 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 CASP5P51878 434 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 SLC4A8Q2Y0W8 1093 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 ARSHQ5FYA8 562 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 AP1ARQ63HQ0 302 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 C16orf86Q6ZW13 317 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 SH3RF3Q8TEJ3 882 aaPredicted RBP10.43□□□□□ -0.74
HOXA1-201ENST00000343060 CTNNBL1Q8WYA6 563 aaPredicted RBP10.43□□□□□ -0.74
HOXA1-201ENST00000343060 C18orf8Q96DM3 657 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 NAF1Q96HR8 494 aaKnown RBP10.43□□□□□ -0.74
HOXA1-201ENST00000343060 RAB3IPQ96QF0 476 aaPredicted RBP10.43□□□□□ -0.74
HOXA1-201ENST00000343060 ZNF287Q9HBT7 754 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 GCNT4Q9P109 453 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 DDX25Q9UHL0 483 aaKnown RBP10.43□□□□□ -0.74
HOXA1-201ENST00000343060 MTMR7Q9Y216 660 aa10.43□□□□□ -0.74
HOXA1-201ENST00000343060 MYH14Q7Z406 1995 aaKnown RBP10.42□□□□□ -0.74
HOXA1-201ENST00000343060 PLIN4Q96Q06 1357 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 NPHP3-ACAD11A0A0J9YXS1 232 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 TMEM120BA0PK00 339 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 CALUO43852 315 aaPredicted RBP10.42□□□□□ -0.74
HOXA1-201ENST00000343060 BRD2P25440 801 aaKnown RBP10.42□□□□□ -0.74
HOXA1-201ENST00000343060 RWDD2BP57060 319 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 BIRC2Q13490 618 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 NBPF20Q3BBV1 942 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 CGB2Q6NT52 195 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 TTC27Q6P3X3 843 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 DZIP1Q86YF9 867 aaKnown RBP10.42□□□□□ -0.74
HOXA1-201ENST00000343060 UTP4Q969X6 686 aaKnown RBP10.42□□□□□ -0.74
HOXA1-201ENST00000343060 ARHGEF26Q96DR7 871 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 BORCS6Q96GS4 357 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 RMDN2Q96LZ7 410 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 TRIM7Q9C029 511 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 DHX36Q9H2U1 1008 aaKnown RBP10.42□□□□□ -0.74
HOXA1-201ENST00000343060 ANKIB1Q9P2G1 1089 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 ASTN1O14525 1302 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 SBF2Q86WG5 1849 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 POTEFA5A3E0 1075 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 TCEA3O75764 348 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 SNUPNO95149 360 aaKnown RBP10.42□□□□□ -0.74
HOXA1-201ENST00000343060 POTEIP0CG38 1075 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 POTEJP0CG39 1038 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 TRHP20396 242 aaPredicted RBP10.42□□□□□ -0.74
HOXA1-201ENST00000343060 ATP5DP30049 168 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 MGAT5Q09328 741 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 SF3A3Q12874 501 aaKnown RBP eCLIP10.42□□□□□ -0.74
HOXA1-201ENST00000343060 PRPF4BQ13523 1007 aaKnown RBP10.42□□□□□ -0.74
HOXA1-201ENST00000343060 TAF11Q15544 211 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 SGSM1Q2NKQ1 1148 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 CCDC38Q502W7 563 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 POTEEQ6S8J3 1075 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 ZDHHC14Q8IZN3 488 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 C12orf50Q8NA57 414 aaPredicted RBP10.42□□□□□ -0.74
HOXA1-201ENST00000343060 GRAMD1AQ96CP6 724 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 OSBPL1AQ9BXW6 950 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 STK33Q9BYT3 514 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 LRMDAQ9H2I8 198 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 RNPEPL1Q9HAU8 725 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms