RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PLPPR4Q7Z2D5 763 aa11.56□□□□□ -0.56
TPM3-207ENST00000341372 SMAP1Q8IYB5 467 aaPredicted RBP11.56□□□□□ -0.56
TPM3-207ENST00000341372 TDHQ8IZJ6 230 aa11.56□□□□□ -0.56
TPM3-207ENST00000341372 FBXO18Q8NFZ0 1043 aa11.56□□□□□ -0.56
TPM3-207ENST00000341372 CAGE1Q8TC20 777 aa11.56□□□□□ -0.56
TPM3-207ENST00000341372 AFAP1L1Q8TED9 768 aa11.56□□□□□ -0.56
TPM3-207ENST00000341372 C8orf76Q96K31 380 aa11.56□□□□□ -0.56
TPM3-207ENST00000341372 NAP1L4Q99733 375 aaKnown RBP11.56□□□□□ -0.56
TPM3-207ENST00000341372 KCNMB3Q9NPA1 279 aa11.56□□□□□ -0.56
TPM3-207ENST00000341372 SIRPGQ9P1W8 387 aa11.56□□□□□ -0.56
TPM3-207ENST00000341372 C17orf102A2RUQ5 167 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 FAM205CA6NFA0 338 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 SLC37A4O43826 429 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 PSMD10O75832 226 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 CYP2C18P33260 490 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 SLC26A2P50443 739 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 CLCN6P51797 869 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 EPHA4P54764 986 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 SERINC5Q86VE9 423 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 TMEM199Q8N511 208 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 DEPDC7Q96QD5 511 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 RABGEF1Q9UJ41 708 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 SCN5AQ14524 2016 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 NRCAMQ92823 1304 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 EPHB4P54760 987 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 CHMP4BP1P59074 171 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 PPIGQ13427 754 aaKnown RBP eCLIP11.55□□□□□ -0.564e-7■□□□□ 9.5
TPM3-207ENST00000341372 BFSP2Q13515 415 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 CUL4AQ13619 759 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 LETM2Q2VYF4 491 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 CCDC60Q8IWA6 550 aaPredicted RBP11.55□□□□□ -0.56
TPM3-207ENST00000341372 CCDC155Q8N6L0 562 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 FAM184AQ8NB25 1140 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 VWCEQ96DN2 955 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 SGSM3Q96HU1 749 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 FOXP1Q9H334 677 aaPredicted RBP11.55□□□□□ -0.56
TPM3-207ENST00000341372 RNPEPQ9H4A4 650 aa11.55□□□□□ -0.56
TPM3-207ENST00000341372 DDX25Q9UHL0 483 aaKnown RBP11.55□□□□□ -0.56
TPM3-207ENST00000341372 IGSF9BQ9UPX0 1349 aa11.54□□□□□ -0.56
TPM3-207ENST00000341372 DDX39AO00148 427 aaKnown RBP11.54□□□□□ -0.56
TPM3-207ENST00000341372 EIF1AYO14602 144 aaKnown RBP11.54□□□□□ -0.56
TPM3-207ENST00000341372 TBX3O15119 743 aa11.54□□□□□ -0.56
TPM3-207ENST00000341372 KLF4O43474 513 aa11.54□□□□□ -0.56
TPM3-207ENST00000341372 CSF2RAP15509 400 aa11.54□□□□□ -0.56
TPM3-207ENST00000341372 ZNF200P98182 395 aaPredicted RBP11.54□□□□□ -0.56
TPM3-207ENST00000341372 LRIT3Q3SXY7 679 aa11.54□□□□□ -0.56
TPM3-207ENST00000341372 LRCH2Q5VUJ6 765 aa11.54□□□□□ -0.56
TPM3-207ENST00000341372 MIS18BP1Q6P0N0 1132 aa11.54□□□□□ -0.56
TPM3-207ENST00000341372 RDM1Q8NG50 284 aa11.54□□□□□ -0.56
TPM3-207ENST00000341372 GLG1Q92896 1179 aa11.54□□□□□ -0.56
TPM3-207ENST00000341372 FRMD6Q96NE9 622 aa11.54□□□□□ -0.56
TPM3-207ENST00000341372 AZI2Q9H6S1 392 aa11.54□□□□□ -0.56
TPM3-207ENST00000341372 KIF3AQ9Y496 699 aa11.54□□□□□ -0.56
TPM3-207ENST00000341372 LAMA3Q16787 3333 aa11.54□□□□□ -0.56
TPM3-207ENST00000341372 MBLAC1A4D2B0 266 aaPredicted RBP11.53□□□□□ -0.56
TPM3-207ENST00000341372 WDR64B1ANS9 1081 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 GAS7O60861 476 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 CAND2O75155 1236 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 GNAT1P11488 350 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 RFC2P35250 354 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 SCTRP47872 440 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 STAT5BP51692 787 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 GUCY1B3Q02153 619 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 PLCB4Q15147 1175 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 SAFBQ15424 915 aaKnown RBP eCLIP11.53□□□□□ -0.56
TPM3-207ENST00000341372 ERMP1Q7Z2K6 904 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 LMBR1Q8WVP7 490 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 WNT8BQ93098 351 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 FAM20AQ96MK3 541 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 TEKT3Q9BXF9 490 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 IL23AQ9NPF7 189 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 TCEAL9Q9UHQ7 104 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 PCDHA10Q9Y5I2 948 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 TET1Q8NFU7 2136 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 CCNT1O60563 726 aaKnown RBP11.53□□□□□ -0.56
TPM3-207ENST00000341372 PFKMP08237 780 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 IQCF3P0C7M6 154 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 MARK3P27448 753 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 SFNP31947 248 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 JAK3P52333 1124 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 CCL23P55773 120 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 PPFIA1Q13136 1202 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 C9orf50Q5SZB4 431 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 RASIP1Q5U651 963 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 FAM160B1Q5W0V3 765 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 PSRC1Q6PGN9 363 aaPredicted RBP11.53□□□□□ -0.56
TPM3-207ENST00000341372 C16orf59Q7L2K0 433 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 RPAINQ86UA6 219 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 ATP6V0A1Q93050 837 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 OSBPL7Q9BZF2 842 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 UNC45AQ9H3U1 944 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 ZNF302Q9NR11 478 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 TYW1Q9NV66 732 aaKnown RBP11.53□□□□□ -0.56
TPM3-207ENST00000341372 SETD4Q9NVD3 440 aa11.53□□□□□ -0.56
TPM3-207ENST00000341372 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.53□□□□□ -0.56
TPM3-207ENST00000341372 SIP14410 1827 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 WNT7AO00755 349 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 PSAPP07602 524 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 CKBP12277 381 aa11.52□□□□□ -0.56
TPM3-207ENST00000341372 SELPP16109 830 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms