RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ABCB5Q2M3G0 1257 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 HYIQ5T013 277 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 SYDE2Q5VT97 1194 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 APOBEC3HQ6NTF7 200 aaKnown RBP15.58■□□□□ 0.08
CPSF7-201ENST00000340437 KAT5Q92993 513 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 CCDC127Q96BQ5 260 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 ELAC2Q9BQ52 826 aaKnown RBP15.58■□□□□ 0.08
CPSF7-201ENST00000340437 TDRD3Q9H7E2 651 aaKnown RBP15.58■□□□□ 0.08
CPSF7-201ENST00000340437 NFS1Q9Y697 457 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 SPOPO43791 374 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 CHN1P15882 459 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 DCAF12L1Q5VU92 463 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 PNMA8AQ86V59 439 aaPredicted RBP15.57■□□□□ 0.08
CPSF7-201ENST00000340437 SEMA4AQ9H3S1 761 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 FAM114A2Q9NRY5 505 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 ALG6Q9Y672 507 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 FRMD3A2A2Y4 597 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 DNM1LO00429 736 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 MMEP08473 750 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 LMNB1P20700 586 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 MAP2K2P36507 400 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 RFFLQ8WZ73 363 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 FAM84AQ96KN4 292 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 POP1Q99575 1024 aaKnown RBP15.57■□□□□ 0.08
CPSF7-201ENST00000340437 BAIAP2L1Q9UHR4 511 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 K7ENM7 598 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 GJC1P36383 396 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 ECE1P42892 770 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 PMS2P54278 862 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 PPP1R7Q15435 360 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 ANKRD42Q8N9B4 389 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 RAB17Q9H0T7 212 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 VEZTQ9HBM0 779 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 COG5Q9UP83 839 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 MYH4Q9Y623 1939 aa15.57■□□□□ 0.08
CPSF7-201ENST00000340437 LRIG3Q6UXM1 1119 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 PPM1KQ8N3J5 372 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 EPS8L3Q8TE67 593 aaKnown RBP15.56■□□□□ 0.08
CPSF7-201ENST00000340437 OSBPL7Q9BZF2 842 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 KCNK9Q9NPC2 374 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 MYH7BA7E2Y1 1941 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 ARHGEF35A5YM69 484 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 TRAPPC3O43617 180 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 ACSL3O95573 720 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 EYA4O95677 639 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 BMP3P12645 472 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 FNTAP49354 379 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 BIRC3Q13489 604 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 CCDC91Q7Z6B0 441 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 JAMLQ86YT9 394 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 CNPY4Q8N129 248 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 PRPF38AQ8NAV1 312 aaKnown RBP15.56■□□□□ 0.08
CPSF7-201ENST00000340437 ZSWIM2Q8NEG5 633 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 FAM118BQ9BPY3 351 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 COA1Q9GZY4 146 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 COL22A1Q8NFW1 1626 aaPredicted RBP15.56■□□□□ 0.08
CPSF7-201ENST00000340437 EMSYQ7Z589 1322 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 TMEM150BA6NC51 233 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 DDR1Q08345 913 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 C2CD6Q53TS8 623 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 PHLDB3Q6NSJ2 640 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 RPUSD2Q8IZ73 545 aaKnown RBP15.56■□□□□ 0.08
CPSF7-201ENST00000340437 TCP11Q8WWU5 503 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 LENG9Q96B70 501 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 PRMT1Q99873 361 aaKnown RBP15.56■□□□□ 0.08
CPSF7-201ENST00000340437 SLITRK6Q9H5Y7 841 aa15.56■□□□□ 0.08
CPSF7-201ENST00000340437 TCRBV7S2A1N4TA0A589 114 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 SORBS3O60504 671 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 SLITRK3O94933 977 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 RPSAP08865 295 aaKnown RBP15.55■□□□□ 0.08
CPSF7-201ENST00000340437 CLTAP09496 248 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 SSR1P43307 286 aaKnown RBP15.55■□□□□ 0.08
CPSF7-201ENST00000340437 EPC2Q52LR7 807 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 CALR3Q96L12 384 aaKnown RBP15.55■□□□□ 0.08
CPSF7-201ENST00000340437 ERP44Q9BS26 406 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 STK33Q9BYT3 514 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 MYO3BQ8WXR4 1341 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 DDX60LQ5H9U9 1706 aaKnown RBP15.55■□□□□ 0.08
CPSF7-201ENST00000340437 SP4Q02446 784 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 ZFYVE27Q5T4F4 411 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 HIBCHQ6NVY1 386 aaPredicted RBP15.55■□□□□ 0.08
CPSF7-201ENST00000340437 DPY19L2P1Q6NXN4 242 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 GIMAP7Q8NHV1 300 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 NEK9Q8TD19 979 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 HVCN1Q96D96 273 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 HES6Q96HZ4 224 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 VCPKMTQ9H867 229 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 HOMER2Q9NSB8 354 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 SLC12A6Q9UHW9 1150 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 NAV1Q8NEY1 1877 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 EP400Q96L91 3159 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 TCP10L2B9ZVM9 353 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 SSTR3P32745 418 aaPredicted RBP15.55■□□□□ 0.08
CPSF7-201ENST00000340437 PRKCIP41743 596 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 JAG1P78504 1218 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 KIAA1755Q5JYT7 1200 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 SPATS2Q86XZ4 545 aaKnown RBP15.55■□□□□ 0.08
CPSF7-201ENST00000340437 KIRREL3Q8IZU9 778 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 SLC30A5Q8TAD4 765 aa15.55■□□□□ 0.08
CPSF7-201ENST00000340437 CCDC17Q96LX7 622 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms