RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 CHST12Q9NRB3 414 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 ANKEF1Q9NU02 776 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 DACT1Q9NYF0 836 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 RGL1Q9NZL6 768 aa14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 WRAP73Q9P2S5 460 aaPredicted RBP14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 PRRC2BQ5JSZ5 2229 aaKnown RBP14.9□□□□□ -0.02
SIRPB3P-201ENST00000340424 DLL1O00548 723 aa14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 ASAP2O43150 1006 aa14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 OR52Z1P0C646 297 aa14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 LINC00271P0C7V0 271 aa14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 XRCC6P12956 609 aaKnown RBP eCLIP14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 CYP4A11Q02928 519 aa14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 DRP2Q13474 957 aa14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 GPM6BQ13491 265 aa14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 SKIV2LQ15477 1246 aaKnown RBP14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 TTC38Q5R3I4 469 aa14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 RHPN2Q8IUC4 686 aa14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 TPH2Q8IWU9 490 aa14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 P2RX5Q93086 422 aa14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 CCDC43Q96MW1 224 aaKnown RBP14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 ATP6V0A4Q9HBG4 840 aa14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 COL4A3BPQ9Y5P4 624 aa14.89□□□□□ -0.03
SIRPB3P-201ENST00000340424 WNT7AO00755 349 aa14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 SKIP12755 728 aa14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 ATP2B1P20020 1258 aa14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 NPEPPSP55786 919 aa14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 CTTNQ14247 550 aaKnown RBP14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 EMC2Q15006 297 aa14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 PCBP1Q15365 356 aaKnown RBP eCLIP14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 CSPP1Q1MSJ5 1256 aa14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 XKR9Q5GH70 373 aa14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 ERMNQ8TAM6 284 aa14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 ASB2Q96Q27 587 aa14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 SH2D3AQ9BRG2 576 aa14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 TRAIPQ9BWF2 469 aa14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 TUFT1Q9NNX1 390 aa14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 AAASQ9NRG9 546 aa14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 STK24Q9Y6E0 443 aa14.88□□□□□ -0.03
SIRPB3P-201ENST00000340424 ARID2Q68CP9 1835 aa14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 A0A087WZ62 844 aa14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 A0A0U1RQF3 1178 aa14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 RBAK-RBAKDNI3L0D1 243 aa14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 LAD1O00515 517 aa14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 DGAT1O75907 488 aa14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 EOMESO95936 686 aa14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 MUTP22033 750 aa14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 MXD4Q14582 209 aaPredicted RBP14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 HAUS3Q68CZ6 603 aa14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 HLA-CQ95604 372 aa14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 NLRP4Q96MN2 994 aa14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 MTRQ99707 1265 aa14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 FDXACB1Q9BRP7 624 aaPredicted RBP14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 POLR3CQ9BUI4 534 aaPredicted RBP14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 RAB34Q9BZG1 259 aa14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 TMEM60Q9H2L4 133 aa14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 MRPL42Q9Y6G3 142 aaKnown RBP14.87□□□□□ -0.03
SIRPB3P-201ENST00000340424 POTEMA6NI47 508 aa14.86□□□□□ -0.03
SIRPB3P-201ENST00000340424 NCK2O43639 380 aa14.86□□□□□ -0.03
SIRPB3P-201ENST00000340424 RAB27AP51159 221 aa14.86□□□□□ -0.03
SIRPB3P-201ENST00000340424 PLCB2Q00722 1185 aa14.86□□□□□ -0.03
SIRPB3P-201ENST00000340424 POU5F1BQ06416 359 aa14.86□□□□□ -0.03
SIRPB3P-201ENST00000340424 ZNF174Q15697 407 aa14.86□□□□□ -0.03
SIRPB3P-201ENST00000340424 SRGAP1Q7Z6B7 1085 aa14.86□□□□□ -0.03
SIRPB3P-201ENST00000340424 ABI1Q8IZP0 508 aa14.86□□□□□ -0.03
SIRPB3P-201ENST00000340424 PRPF31Q8WWY3 499 aaKnown RBP14.86□□□□□ -0.03
SIRPB3P-201ENST00000340424 COL25A1Q9BXS0 654 aaPredicted RBP14.86□□□□□ -0.03
SIRPB3P-201ENST00000340424 TMEM117Q9H0C3 514 aa14.86□□□□□ -0.03
SIRPB3P-201ENST00000340424 NSUN3Q9H649 340 aaKnown RBP14.86□□□□□ -0.03
SIRPB3P-201ENST00000340424 IFT122Q9HBG6 1241 aa14.86□□□□□ -0.03
SIRPB3P-201ENST00000340424 PRDM6Q9NQX0 595 aa14.86□□□□□ -0.03
SIRPB3P-201ENST00000340424 CUL9Q8IWT3 2517 aa14.86□□□□□ -0.03
SIRPB3P-201ENST00000340424 CARNS1A5YM72 827 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 TBKBP1A7MCY6 615 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 H3BQV1 296 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 RPA1P27694 616 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 TECP42680 631 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 PHKA2P46019 1235 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 RARRES1P49788 294 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 LAMTOR4Q0VGL1 99 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 TFDP1Q14186 410 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 PAN2Q504Q3 1202 aaKnown RBP14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 RILPL1Q5EBL4 403 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 CATSPER4Q7RTX7 472 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 FERMT3Q86UX7 667 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 ECHDC2Q86YB7 292 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 LRRC43Q8N309 656 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 TMEM143Q96AN5 459 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 MS4A3Q96HJ5 214 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 ZNF668Q96K58 619 aaPredicted RBP14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 NACC1Q96RE7 527 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 DBR1Q9UK59 544 aaKnown RBP14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 SMC3Q9UQE7 1217 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 PCDHB12Q9Y5F1 795 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 MUC3AQ02505 3323 aa14.85□□□□□ -0.03
SIRPB3P-201ENST00000340424 FNDC1Q4ZHG4 1894 aaPredicted RBP14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 CD2BP2O95400 341 aaKnown RBP14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 SPATA31C1P0DKV0 1188 aa14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 LAG3P18627 525 aa14.84□□□□□ -0.03
SIRPB3P-201ENST00000340424 GJB2P29033 226 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms