RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 XPO4Q9C0E2 1151 aaKnown RBP7.88□□□□□ -1.15
NUP43-201ENST00000340413 TMX1Q9H3N1 280 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 SLC39A2Q9NP94 309 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 NRCAMQ92823 1304 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 MBLAC1A4D2B0 266 aaPredicted RBP7.88□□□□□ -1.15
NUP43-201ENST00000340413 ARIH2O95376 493 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 LGALS2P05162 132 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 PGK2P07205 417 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 GNAT1P11488 350 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 INTS8Q75QN2 995 aaKnown RBP7.88□□□□□ -1.15
NUP43-201ENST00000340413 DHX38Q92620 1227 aaKnown RBP7.88□□□□□ -1.15
NUP43-201ENST00000340413 CCDC113Q9H0I3 377 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 XPNPEP1Q9NQW7 623 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 IFNKQ9P0W0 207 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 SEPT9Q9UHD8 586 aaPredicted RBP7.88□□□□□ -1.15
NUP43-201ENST00000340413 SMIM35A0A1B0GVV1 85 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 AP5Z1O43299 807 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 AXLP30530 894 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 POLGP54098 1239 aaPredicted RBP7.88□□□□□ -1.15
NUP43-201ENST00000340413 CLDN10P78369 228 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 SP3Q02447 781 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 SRGAP1Q7Z6B7 1085 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 ZSCAN30Q86W11 494 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 SLAIN1Q8ND83 568 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 OR6J1Q8NGC5 347 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 JAKMIP2Q96AA8 810 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 CALR3Q96L12 384 aaKnown RBP7.88□□□□□ -1.15
NUP43-201ENST00000340413 SRRTQ9BXP5 876 aaKnown RBP7.88□□□□□ -1.15
NUP43-201ENST00000340413 ZNHIT6Q9NWK9 470 aaKnown RBP7.88□□□□□ -1.15
NUP43-201ENST00000340413 CPA4Q9UI42 421 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 TBX20Q9UMR3 447 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 ZKSCAN5Q9Y2L8 839 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 SQORQ9Y6N5 450 aa7.88□□□□□ -1.15
NUP43-201ENST00000340413 ZNF500O60304 480 aaPredicted RBP7.87□□□□□ -1.15
NUP43-201ENST00000340413 ZC3H11AO75152 810 aaKnown RBP eCLIP7.87□□□□□ -1.15
NUP43-201ENST00000340413 GFPT2O94808 682 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 NR3C1P04150 777 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 SSBP05455 408 aaKnown RBP eCLIP7.87□□□□□ -1.15
NUP43-201ENST00000340413 HAUS6Q7Z4H7 955 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 FBXO16Q8IX29 292 aaPredicted RBP7.87□□□□□ -1.15
NUP43-201ENST00000340413 TXLNBQ8N3L3 684 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 PIGOQ8TEQ8 1089 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 RSPH1Q8WYR4 309 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 PURBQ96QR8 312 aaKnown RBP7.87□□□□□ -1.15
NUP43-201ENST00000340413 PLIN2Q99541 437 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 TUBGCP2Q9BSJ2 902 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 C16orf70Q9BSU1 422 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 AP5M1Q9H0R1 490 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 MCM3APO60318 1980 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 GOLGA6L9A6NEM1 432 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 ZBTB42B2RXF5 422 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 ADCY3O60266 1144 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 GCNT3O95395 438 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 TMOD1P28289 359 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 HOXD13P35453 343 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 NT5DC4Q86YG4 428 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 ZBTB8OSQ8IWT0 167 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 GJA10Q969M2 543 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 KMT5AQ9NQR1 393 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 AGPAT3Q9NRZ7 376 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 K7ENM7 598 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 DDX39AO00148 427 aaKnown RBP7.87□□□□□ -1.15
NUP43-201ENST00000340413 SEPT4O43236 478 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 TGFB1I1O43294 461 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 C22orf31O95567 290 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 SMPD1P17405 629 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 NPTX2P47972 431 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 PSPC1Q8WXF1 523 aaKnown RBP7.87□□□□□ -1.15
NUP43-201ENST00000340413 STAMQ92783 540 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 POLR3FQ9H1D9 316 aaPredicted RBP7.87□□□□□ -1.15
NUP43-201ENST00000340413 SAMSN1Q9NSI8 373 aaKnown RBP7.87□□□□□ -1.15
NUP43-201ENST00000340413 PRMT7Q9NVM4 692 aaPredicted RBP7.87□□□□□ -1.15
NUP43-201ENST00000340413 SRRDQ9UH36 339 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 CAPN11Q9UMQ6 739 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 FRMD4BQ9Y2L6 1034 aa7.87□□□□□ -1.15
NUP43-201ENST00000340413 HMGCRP04035 888 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 ADRB2P07550 413 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 PAX3P23760 479 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 CASP1P29466 404 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 LY6KQ17RY6 165 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 MIIPQ5JXC2 388 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 CD302Q8IX05 232 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 MFSD14AQ96MC6 490 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 INO80BQ9C086 356 aaPredicted RBP7.86□□□□□ -1.15
NUP43-201ENST00000340413 SPC25Q9HBM1 224 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 SCN10AQ9Y5Y9 1956 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 KIF2AO00139 706 aaPredicted RBP7.86□□□□□ -1.15
NUP43-201ENST00000340413 USO1O60763 962 aaKnown RBP7.86□□□□□ -1.15
NUP43-201ENST00000340413 TBC1D8BQ0IIM8 1120 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 STRN3Q13033 797 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 ERCC4Q92889 916 aaPredicted RBP7.86□□□□□ -1.15
NUP43-201ENST00000340413 TTYH3Q9C0H2 523 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 ARMCX3Q9UH62 379 aaPredicted RBP7.86□□□□□ -1.15
NUP43-201ENST00000340413 MYBP10242 640 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 PROZP22891 400 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 PHKA2P46019 1235 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 ADAM17P78536 824 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 ADAM9Q13443 819 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 CCDC144BQ3MJ40 725 aa7.86□□□□□ -1.15
NUP43-201ENST00000340413 XXYLT1Q8NBI6 393 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms