RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 NEDD1Q8NHV4 660 aa12.52□□□□□ -0.4
ZNF648-201ENST00000339948 H0YGN5 161 aa12.52□□□□□ -0.41
ZNF648-201ENST00000339948 ADCY8P40145 1251 aa12.52□□□□□ -0.41
ZNF648-201ENST00000339948 FXR2P51116 673 aaKnown RBP eCLIP12.52□□□□□ -0.41
ZNF648-201ENST00000339948 FAM98CQ17RN3 349 aaKnown RBP12.52□□□□□ -0.41
ZNF648-201ENST00000339948 ODR4Q5SWX8 454 aa12.52□□□□□ -0.41
ZNF648-201ENST00000339948 RBM26Q5T8P6 1007 aaKnown RBP12.52□□□□□ -0.41
ZNF648-201ENST00000339948 CD302Q8IX05 232 aa12.52□□□□□ -0.41
ZNF648-201ENST00000339948 LNX1Q8TBB1 728 aaPredicted RBP12.52□□□□□ -0.41
ZNF648-201ENST00000339948 ACTRT1Q8TDG2 376 aa12.52□□□□□ -0.41
ZNF648-201ENST00000339948 TMEM237Q96Q45 408 aa12.52□□□□□ -0.41
ZNF648-201ENST00000339948 ALG13Q9NP73 1137 aaKnown RBP12.52□□□□□ -0.41
ZNF648-201ENST00000339948 RABGAP1Q9Y3P9 1069 aa12.52□□□□□ -0.41
ZNF648-201ENST00000339948 NFS1Q9Y697 457 aa12.52□□□□□ -0.41
ZNF648-201ENST00000339948 SPEF2Q9C093 1822 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 ANKRD62A6NC57 917 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 CLDN3O15551 220 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 BRAFP15056 766 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 TNFRSF8P28908 595 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 ZNF131P52739 623 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 SEPT7Q16181 437 aaKnown RBP12.51□□□□□ -0.41
ZNF648-201ENST00000339948 AGBL2Q5U5Z8 902 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 KAZNQ674X7 775 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 C6orf89Q6UWU4 347 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 ERICH1Q86X53 443 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 FAM178BQ8IXR5 827 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 CCT6BQ92526 530 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 RUBCNQ92622 972 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 CNOT10Q9H9A5 744 aaKnown RBP12.51□□□□□ -0.41
ZNF648-201ENST00000339948 NKIRAS1Q9NYS0 192 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 AIPL1Q9NZN9 384 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 TTC7AQ9ULT0 858 aaPredicted RBP12.51□□□□□ -0.41
ZNF648-201ENST00000339948 COL5A2P05997 1499 aaPredicted RBP12.51□□□□□ -0.41
ZNF648-201ENST00000339948 ANKRD63C9JTQ0 380 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 FOXN3O00409 490 aaPredicted RBP12.51□□□□□ -0.41
ZNF648-201ENST00000339948 SORBS3O60504 671 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 SUN1O94901 812 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 FGRP09769 529 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 FERP16591 822 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 SP4Q02446 784 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 BYSLQ13895 437 aaKnown RBP12.51□□□□□ -0.41
ZNF648-201ENST00000339948 QRICH1Q2TAL8 776 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 TAOK1Q7L7X3 1001 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 ZBTB10Q96DT7 871 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 PABPC3Q9H361 631 aaKnown RBP12.51□□□□□ -0.41
ZNF648-201ENST00000339948 SLITRK6Q9H5Y7 841 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 HOMER3Q9NSC5 361 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 BZW2Q9Y6E2 419 aaKnown RBP12.51□□□□□ -0.41
ZNF648-201ENST00000339948 KDM3AQ9Y4C1 1321 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 MYL7Q01449 175 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 CCDC6Q16204 474 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 CCDC174Q6PII3 467 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 SUPT20HQ8NEM7 779 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 RFFLQ8WZ73 363 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 KAT5Q92993 513 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 EDEM3Q9BZQ6 932 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 KLHL11Q9NVR0 708 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 MTUS1Q9ULD2 1270 aa12.51□□□□□ -0.41
ZNF648-201ENST00000339948 PNMA6FA0A0J9YX94 578 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 PPP1R11O60927 126 aaPredicted RBP12.5□□□□□ -0.41
ZNF648-201ENST00000339948 PLCB3Q01970 1234 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 DDR1Q08345 913 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 BIRC2Q13490 618 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 ERMARDQ5T6L9 678 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 ZNF572Q7Z3I7 529 aaPredicted RBP12.5□□□□□ -0.41
ZNF648-201ENST00000339948 YTHDF3Q7Z739 585 aaKnown RBP12.5□□□□□ -0.41
ZNF648-201ENST00000339948 RPUSD2Q8IZ73 545 aaKnown RBP12.5□□□□□ -0.41
ZNF648-201ENST00000339948 HAUS1Q96CS2 278 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 NAP1L3Q99457 506 aaPredicted RBP12.5□□□□□ -0.41
ZNF648-201ENST00000339948 NOP53Q9NZM5 478 aaKnown RBP12.5□□□□□ -0.41
ZNF648-201ENST00000339948 KLHL14Q9P2G3 628 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 MYH7P12883 1935 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 UBAP1LF5GYI3 381 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 KRT15P19012 456 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 COMTP21964 271 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 ARSHQ5FYA8 562 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 TGS1Q96RS0 853 aaKnown RBP12.5□□□□□ -0.41
ZNF648-201ENST00000339948 MTMR4Q9NYA4 1195 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.5□□□□□ -0.41
ZNF648-201ENST00000339948 TCEAL9Q9UHQ7 104 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 ZNF335Q9H4Z2 1342 aaPredicted RBP12.5□□□□□ -0.41
ZNF648-201ENST00000339948 KRT16P08779 473 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 SOX5P35711 763 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 ARHGAP4P98171 946 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 PDIA5Q14554 519 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 CBWD6Q4V339 395 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 SGO2Q562F6 1265 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 CBWD3Q5JTY5 395 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 CBWD5Q5RIA9 395 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 FMNL3Q8IVF7 1028 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 LRRC57Q8N9N7 239 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 LINC00116Q8NCU8 138 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 ZNF653Q96CK0 615 aa12.5□□□□□ -0.41
ZNF648-201ENST00000339948 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.5□□□□□ -0.41
ZNF648-201ENST00000339948 TARSP26639 723 aaKnown RBP12.49□□□□□ -0.41
ZNF648-201ENST00000339948 ZCWPW2Q504Y3 356 aa12.49□□□□□ -0.41
ZNF648-201ENST00000339948 IFNB1P01574 187 aa12.49□□□□□ -0.41
ZNF648-201ENST00000339948 LMNB1P20700 586 aa12.49□□□□□ -0.41
ZNF648-201ENST00000339948 PSMC2P35998 433 aaKnown RBP12.49□□□□□ -0.41
ZNF648-201ENST00000339948 PDE6CP51160 858 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms