RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 CCDC88AQ3V6T2 1871 aa17.45■□□□□ 0.38
SCARB1-202ENST00000339570 UBAP1LF5GYI3 381 aa17.45■□□□□ 0.38
SCARB1-202ENST00000339570 DAB2IPQ5VWQ8 1189 aa17.45■□□□□ 0.38
SCARB1-202ENST00000339570 C6orf89Q6UWU4 347 aa17.45■□□□□ 0.38
SCARB1-202ENST00000339570 CAPN12Q6ZSI9 719 aa17.45■□□□□ 0.38
SCARB1-202ENST00000339570 EIF2AK1Q9BQI3 630 aaKnown RBP17.45■□□□□ 0.38
SCARB1-202ENST00000339570 ABCF3Q9NUQ8 709 aa17.45■□□□□ 0.38
SCARB1-202ENST00000339570 CCDC188H7C350 402 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 DRD4P21917 467 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 SHMT1P34896 483 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 SOX5P35711 763 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 GCLMP48507 274 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 CLNS1AP54105 237 aaKnown RBP17.44■□□□□ 0.38
SCARB1-202ENST00000339570 DLG4P78352 724 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 HP1BP3Q5SSJ5 553 aaPredicted RBP17.44■□□□□ 0.38
SCARB1-202ENST00000339570 FRMD5Q7Z6J6 570 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 SYCE1Q8N0S2 351 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 ZSWIM2Q8NEG5 633 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 ATP8B4Q8TF62 1192 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 PRCCQ92733 491 aaPredicted RBP17.44■□□□□ 0.38
SCARB1-202ENST00000339570 TATDN2Q93075 761 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 DDX23Q9BUQ8 820 aaKnown RBP17.44■□□□□ 0.38
SCARB1-202ENST00000339570 ALG6Q9Y672 507 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 RASSF9O75901 435 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 FTLP02792 175 aaPredicted RBP17.44■□□□□ 0.38
SCARB1-202ENST00000339570 EDRF1Q3B7T1 1238 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 ODR4Q5SWX8 454 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 C1orf54Q8WWF1 131 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 ERP44Q9BS26 406 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 YY1AP1Q9H869 796 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 FAM114A2Q9NRY5 505 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 BZW2Q9Y6E2 419 aaKnown RBP17.44■□□□□ 0.38
SCARB1-202ENST00000339570 DLEC1Q9Y238 1755 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 MSH4O15457 936 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 SPOPO43791 374 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 TRIM37O94972 964 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 RPL21P46778 160 aaKnown RBP17.44■□□□□ 0.38
SCARB1-202ENST00000339570 EPC2Q52LR7 807 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 PRR5LQ6MZQ0 368 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 NGLY1Q96IV0 654 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 RAB17Q9H0T7 212 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 TYW1Q9NV66 732 aaKnown RBP17.44■□□□□ 0.38
SCARB1-202ENST00000339570 SAMD15Q9P1V8 674 aa17.44■□□□□ 0.38
SCARB1-202ENST00000339570 SUCLA2Q9P2R7 463 aaPredicted RBP17.44■□□□□ 0.38
SCARB1-202ENST00000339570 TGFB1I1O43294 461 aa17.43■□□□□ 0.38
SCARB1-202ENST00000339570 MYO1EQ12965 1108 aa17.43■□□□□ 0.38
SCARB1-202ENST00000339570 CERS5Q8N5B7 392 aa17.43■□□□□ 0.38
SCARB1-202ENST00000339570 TBC1D16Q8TBP0 767 aa17.43■□□□□ 0.38
SCARB1-202ENST00000339570 DBNDD1Q9H9R9 158 aa17.43■□□□□ 0.38
SCARB1-202ENST00000339570 SLC24A3Q9HC58 644 aa17.43■□□□□ 0.38
SCARB1-202ENST00000339570 SCN7AQ01118 1682 aa17.43■□□□□ 0.38
SCARB1-202ENST00000339570 DLATP10515 647 aaKnown RBP17.43■□□□□ 0.38
SCARB1-202ENST00000339570 FERP16591 822 aa17.43■□□□□ 0.38
SCARB1-202ENST00000339570 CLK2P49760 499 aaKnown RBP17.43■□□□□ 0.38
SCARB1-202ENST00000339570 KIAA1755Q5JYT7 1200 aa17.43■□□□□ 0.38
SCARB1-202ENST00000339570 FAM178BQ8IXR5 827 aa17.43■□□□□ 0.38
SCARB1-202ENST00000339570 CCDC63Q8NA47 563 aa17.43■□□□□ 0.38
SCARB1-202ENST00000339570 RFFLQ8WZ73 363 aa17.43■□□□□ 0.38
SCARB1-202ENST00000339570 SGSM3Q96HU1 749 aa17.43■□□□□ 0.38
SCARB1-202ENST00000339570 TRIM33Q9UPN9 1127 aa17.43■□□□□ 0.38
SCARB1-202ENST00000339570 MEIS2O14770 477 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 HLA-DOAP06340 250 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 EZRP15311 586 aaKnown RBP17.42■□□□□ 0.38
SCARB1-202ENST00000339570 FMO5P49326 533 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 SLC30A5Q8TAD4 765 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 ATG4AQ8WYN0 398 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 STAMBPL1Q96FJ0 436 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 INTS2Q9H0H0 1204 aaKnown RBP17.42■□□□□ 0.38
SCARB1-202ENST00000339570 FGFR1OP2Q9NVK5 253 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.42■□□□□ 0.38
SCARB1-202ENST00000339570 SUFUQ9UMX1 484 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 A8MUI8 341 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 GCFC2P16383 781 aaKnown RBP17.42■□□□□ 0.38
SCARB1-202ENST00000339570 MYL7Q01449 175 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 MAP2K1Q02750 393 aaPredicted RBP17.42■□□□□ 0.38
SCARB1-202ENST00000339570 CCDC137Q6PK04 289 aaKnown RBP17.42■□□□□ 0.38
SCARB1-202ENST00000339570 ANKS4BQ8N8V4 417 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 CCDC127Q96BQ5 260 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 HES6Q96HZ4 224 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 SLITRK6Q9H5Y7 841 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 FRMD4BQ9Y2L6 1034 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 IRS2Q9Y4H2 1338 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 PSMC2P35998 433 aaKnown RBP17.42■□□□□ 0.38
SCARB1-202ENST00000339570 SSR1P43307 286 aaKnown RBP17.42■□□□□ 0.38
SCARB1-202ENST00000339570 NEDD9Q14511 834 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 TTC27Q6P3X3 843 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 HS2ST1Q7LGA3 356 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 HOOK3Q86VS8 718 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 SYT2Q8N9I0 419 aaPredicted RBP17.42■□□□□ 0.38
SCARB1-202ENST00000339570 KCNMB3Q9NPA1 279 aa17.42■□□□□ 0.38
SCARB1-202ENST00000339570 TMEM150BA6NC51 233 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 PDXKO00764 312 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 UPP2O95045 317 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 ZFYVE27Q5T4F4 411 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 PHLDB3Q6NSJ2 640 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 RINT1Q6NUQ1 792 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 DPY19L2P1Q6NXN4 242 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 PRUNE1Q86TP1 453 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 RPUSD2Q8IZ73 545 aaKnown RBP17.41■□□□□ 0.38
SCARB1-202ENST00000339570 CALR3Q96L12 384 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms