RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 PPP1R12CQ9BZL4 782 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 AP5M1Q9H0R1 490 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 ACAD9Q9H845 621 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 TUFT1Q9NNX1 390 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 YWHABP31946 246 aaKnown RBP17.22■□□□□ 0.35
CCNY-202ENST00000339497 PKN1Q16512 942 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 CCDC197Q8NCU1 140 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 PSPC1Q8WXF1 523 aaKnown RBP17.22■□□□□ 0.35
CCNY-202ENST00000339497 POLR3FQ9H1D9 316 aaPredicted RBP17.22■□□□□ 0.35
CCNY-202ENST00000339497 VCPKMTQ9H867 229 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 SNX12Q9UMY4 172 aa17.22■□□□□ 0.35
CCNY-202ENST00000339497 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 ESYT2A0FGR8 921 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 UCHL3P15374 230 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 GABPAQ06546 454 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 DARS2Q6PI48 645 aaKnown RBP17.21■□□□□ 0.35
CCNY-202ENST00000339497 PDZD4Q76G19 769 aaPredicted RBP17.21■□□□□ 0.35
CCNY-202ENST00000339497 KIAA1586Q9HCI6 787 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 NWD1Q149M9 1564 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 SOX5P35711 763 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 HNRNPH2P55795 449 aaKnown RBP17.21■□□□□ 0.35
CCNY-202ENST00000339497 SURF1Q15526 300 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 EARS2Q5JPH6 523 aaKnown RBP17.21■□□□□ 0.35
CCNY-202ENST00000339497 SPATS2Q86XZ4 545 aaKnown RBP17.21■□□□□ 0.35
CCNY-202ENST00000339497 ZNF564Q8TBZ8 553 aaPredicted RBP17.21■□□□□ 0.35
CCNY-202ENST00000339497 FBXO28Q9NVF7 368 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 SYNGAP1Q96PV0 1343 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 IL9RQ01113 521 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 ZNF568Q3ZCX4 644 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 TMEM35BQ8NCS4 154 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 CCT6BQ92526 530 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 RNF25Q96BH1 459 aaPredicted RBP17.21■□□□□ 0.35
CCNY-202ENST00000339497 LRRC1Q9BTT6 524 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 NUP85Q9BW27 656 aa17.21■□□□□ 0.35
CCNY-202ENST00000339497 MYO1EQ12965 1108 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 SLC18A3Q16572 532 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 PPP1R2P3Q6NXS1 205 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 ILDR1Q86SU0 546 aaPredicted RBP17.2■□□□□ 0.34
CCNY-202ENST00000339497 MS4A14Q96JA4 679 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 MTRQ99707 1265 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 EXOC1LA0A1B0GW35 172 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 PRPSAP2O60256 369 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 SUN1O94901 812 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 SMARCA1P28370 1054 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 CATSPER4Q7RTX7 472 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 MICALL2Q8IY33 904 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 FAM151AQ8WW52 585 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 SCINQ9Y6U3 715 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 PSMD14O00487 310 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 TBX3O15119 743 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 PSMA2P25787 234 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 FXR2P51116 673 aaKnown RBP eCLIP17.2■□□□□ 0.34
CCNY-202ENST00000339497 PDE1BQ01064 536 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 RHPN2Q8IUC4 686 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 RTFDC1Q9BY42 306 aaPredicted RBP17.2■□□□□ 0.34
CCNY-202ENST00000339497 SLC38A10Q9HBR0 1119 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 SMIM22K7EJ46 135 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 GIPC1O14908 333 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 ZNF18P17022 549 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 SSTR3P32745 418 aaPredicted RBP17.2■□□□□ 0.34
CCNY-202ENST00000339497 RASSF2P50749 326 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 ITKQ08881 620 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 NFX1Q12986 1120 aaKnown RBP17.2■□□□□ 0.34
CCNY-202ENST00000339497 NYAP1Q6ZVC0 841 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 RSRC2Q7L4I2 434 aaKnown RBP17.2■□□□□ 0.34
CCNY-202ENST00000339497 FBXL13Q8NEE6 735 aa17.2■□□□□ 0.34
CCNY-202ENST00000339497 MAGED2Q9UNF1 606 aaPredicted RBP17.2■□□□□ 0.34
CCNY-202ENST00000339497 RPA1P27694 616 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 RSBN1LQ6PCB5 846 aaPredicted RBP17.19■□□□□ 0.34
CCNY-202ENST00000339497 ARHGAP24Q8N264 748 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 TCP11Q8WWU5 503 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 RFFLQ8WZ73 363 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 FAM217BQ9NTX9 383 aaPredicted RBP17.19■□□□□ 0.34
CCNY-202ENST00000339497 SMARCAL1Q9NZC9 954 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 AMACRQ9UHK6 382 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 CNOT7Q9UIV1 285 aaKnown RBP17.19■□□□□ 0.34
CCNY-202ENST00000339497 FHOD1Q9Y613 1164 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 BCL9O00512 1426 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 PODXLO00592 558 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 CYP26A1O43174 497 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 PSMD6Q15008 389 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.19■□□□□ 0.342e-7■■□□□ 12
CCNY-202ENST00000339497 LRRC4Q9HBW1 653 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 NOC2LQ9Y3T9 749 aaKnown RBP17.19■□□□□ 0.34
CCNY-202ENST00000339497 ZNF699Q32M78 642 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 SPOUT1Q5T280 376 aaKnown RBP17.19■□□□□ 0.34
CCNY-202ENST00000339497 CATSPER3Q86XQ3 398 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 OR6B3Q8NGW1 331 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 DCCP43146 1447 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 HMGB1P1B2RPK0 211 aaPredicted RBP17.19■□□□□ 0.34
CCNY-202ENST00000339497 PPP6R3Q5H9R7 873 aaPredicted RBP17.19■□□□□ 0.34
CCNY-202ENST00000339497 ELOA2Q8IYF1 753 aaPredicted RBP17.19■□□□□ 0.34
CCNY-202ENST00000339497 ZNF526Q8TF50 670 aaPredicted RBP17.19■□□□□ 0.34
CCNY-202ENST00000339497 FAM167AQ96KS9 214 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 AGBL1Q96MI9 1066 aa17.19■□□□□ 0.34
CCNY-202ENST00000339497 COL5A2P05997 1499 aaPredicted RBP17.18■□□□□ 0.34
CCNY-202ENST00000339497 EIF3BP55884 814 aaKnown RBP17.18■□□□□ 0.34
CCNY-202ENST00000339497 GDAP1Q8TB36 358 aa17.18■□□□□ 0.34
CCNY-202ENST00000339497 RBAKQ9NYW8 714 aaPredicted RBP17.18■□□□□ 0.34
CCNY-202ENST00000339497 SLC9A2Q9UBY0 812 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms