RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 UBALD2Q8IYN6 164 aa15.99■□□□□ 0.15
COMMD4-202ENST00000338995 SLC39A11Q8N1S5 342 aa15.99■□□□□ 0.15
COMMD4-202ENST00000338995 HELQQ8TDG4 1101 aa15.99■□□□□ 0.15
COMMD4-202ENST00000338995 LENG9Q96B70 501 aa15.99■□□□□ 0.15
COMMD4-202ENST00000338995 ZNF668Q96K58 619 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-202ENST00000338995 APOL5Q9BWW9 433 aa15.99■□□□□ 0.15
COMMD4-202ENST00000338995 TSHZ2Q9NRE2 1034 aa15.99■□□□□ 0.15
COMMD4-202ENST00000338995 RNF19AQ9NV58 838 aa15.99■□□□□ 0.15
COMMD4-202ENST00000338995 VPS54Q9P1Q0 977 aa15.99■□□□□ 0.15
COMMD4-202ENST00000338995 STK39Q9UEW8 545 aa15.99■□□□□ 0.15
COMMD4-202ENST00000338995 SEPT9Q9UHD8 586 aaPredicted RBP15.99■□□□□ 0.15
COMMD4-202ENST00000338995 SNX14Q9Y5W7 946 aa15.99■□□□□ 0.15
COMMD4-202ENST00000338995 PLXNA4Q9HCM2 1894 aa15.99■□□□□ 0.15
COMMD4-202ENST00000338995 C2orf71A6NGG8 1288 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 DDX11L8A8MPP1 907 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 CPLX1O14810 134 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 AVPR2P30518 371 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 POLGP54098 1239 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-202ENST00000338995 BCAR1P56945 870 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 RNASELQ05823 741 aaKnown RBP15.98■□□□□ 0.15
COMMD4-202ENST00000338995 TARBP2Q15633 366 aaKnown RBP15.98■□□□□ 0.15
COMMD4-202ENST00000338995 NTRK3Q16288 839 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 MTERF2Q49AM1 385 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 Q4G0T1 1027 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 CLLU1OSQ5K130 101 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 IER5LQ5T953 404 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 TWF2Q6IBS0 349 aaKnown RBP15.98■□□□□ 0.15
COMMD4-202ENST00000338995 GALNT17Q6IS24 598 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 GLB1LQ6UWU2 654 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 ZNF598Q86UK7 904 aaKnown RBP15.98■□□□□ 0.15
COMMD4-202ENST00000338995 ZNF410Q86VK4 478 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 FAM177A1Q8N128 213 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-202ENST00000338995 TBCKQ8TEA7 893 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 PGBD4Q96DM1 585 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 TRAIPQ9BWF2 469 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 UNC45AQ9H3U1 944 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 DZANK1Q9NVP4 752 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 SUCLA2Q9P2R7 463 aaPredicted RBP15.98■□□□□ 0.15
COMMD4-202ENST00000338995 PCDHA4Q9UN74 947 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 HCFC2Q9Y5Z7 792 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 ZNF318Q5VUA4 2279 aa15.98■□□□□ 0.15
COMMD4-202ENST00000338995 ADAMTS3O15072 1205 aa15.97■□□□□ 0.15
COMMD4-202ENST00000338995 CLASP2O75122 1294 aaKnown RBP15.97■□□□□ 0.15
COMMD4-202ENST00000338995 PDIA3P30101 505 aaKnown RBP15.97■□□□□ 0.15
COMMD4-202ENST00000338995 PBX3P40426 434 aa15.97■□□□□ 0.15
COMMD4-202ENST00000338995 PHKA2P46019 1235 aa15.97■□□□□ 0.15
COMMD4-202ENST00000338995 RAB27AP51159 221 aa15.97■□□□□ 0.15
COMMD4-202ENST00000338995 CCT2P78371 535 aaKnown RBP15.97■□□□□ 0.15
COMMD4-202ENST00000338995 PPFIBP1Q86W92 1011 aa15.97■□□□□ 0.15
COMMD4-202ENST00000338995 VPS52Q8N1B4 723 aa15.97■□□□□ 0.15
COMMD4-202ENST00000338995 PLCD3Q8N3E9 789 aa15.97■□□□□ 0.15
COMMD4-202ENST00000338995 PRSS33Q8NF86 280 aa15.97■□□□□ 0.15
COMMD4-202ENST00000338995 AGXT2Q9BYV1 514 aa15.97■□□□□ 0.15
COMMD4-202ENST00000338995 NID2Q14112 1375 aa15.97■□□□□ 0.15
COMMD4-202ENST00000338995 C5orf42Q9H799 3197 aa15.97■□□□□ 0.15
COMMD4-202ENST00000338995 CYP3A7-CYP3A51PA0A087WV96 503 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 A0A087WZ62 844 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 NT5C1B-RDH14C9J2C7 533 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 ST18O60284 1047 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 PSMD10O75832 226 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 DEXIO95424 95 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 FGFR4P22455 802 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 CYP3A7P24462 503 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 EVCP57679 992 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 PSMC5P62195 406 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 MTMR3Q13615 1198 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 CATSPER4Q7RTX7 472 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 DDX53Q86TM3 631 aaKnown RBP15.96■□□□□ 0.15
COMMD4-202ENST00000338995 RHPN2Q8IUC4 686 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 BLIDQ8IZY5 108 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 KREMEN2Q8NCW0 462 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 ASIC4Q96FT7 647 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 FDXACB1Q9BRP7 624 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-202ENST00000338995 SLKQ9H2G2 1235 aaPredicted RBP15.96■□□□□ 0.15
COMMD4-202ENST00000338995 KANSL3Q9P2N6 904 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 SORCS3Q9UPU3 1222 aa15.96■□□□□ 0.15
COMMD4-202ENST00000338995 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-202ENST00000338995 SPDYE4A6NLX3 237 aa15.95■□□□□ 0.14
COMMD4-202ENST00000338995 MARCH6O60337 910 aa15.95■□□□□ 0.14
COMMD4-202ENST00000338995 ZNF623O75123 536 aa15.95■□□□□ 0.14
COMMD4-202ENST00000338995 ZC3H11AO75152 810 aaKnown RBP eCLIP15.95■□□□□ 0.14
COMMD4-202ENST00000338995 MAFO75444 373 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-202ENST00000338995 CSDE1O75534 798 aaKnown RBP15.95■□□□□ 0.14
COMMD4-202ENST00000338995 SP100P23497 879 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-202ENST00000338995 UGCGQ16739 394 aa15.95■□□□□ 0.14
COMMD4-202ENST00000338995 NOMO2Q5JPE7 1267 aa15.95■□□□□ 0.14
COMMD4-202ENST00000338995 MOXD1Q6UVY6 613 aa15.95■□□□□ 0.14
COMMD4-202ENST00000338995 URGCPQ8TCY9 931 aa15.95■□□□□ 0.14
COMMD4-202ENST00000338995 ATOH1Q92858 354 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-202ENST00000338995 FAM193BQ96PV7 902 aaPredicted RBP15.95■□□□□ 0.14
COMMD4-202ENST00000338995 DBR1Q9UK59 544 aaKnown RBP15.95■□□□□ 0.14
COMMD4-202ENST00000338995 PIN4Q9Y237 131 aaKnown RBP15.95■□□□□ 0.14
COMMD4-202ENST00000338995 PPME1Q9Y570 386 aa15.95■□□□□ 0.14
COMMD4-202ENST00000338995 IRAK3Q9Y616 596 aa15.95■□□□□ 0.14
COMMD4-202ENST00000338995 IGKV6-21A0A0C4DH24 114 aa15.94■□□□□ 0.14
COMMD4-202ENST00000338995 ALDH2P05091 517 aa15.94■□□□□ 0.14
COMMD4-202ENST00000338995 CTSAP10619 480 aa15.94■□□□□ 0.14
COMMD4-202ENST00000338995 NONOQ15233 471 aaKnown RBP eCLIP15.94■□□□□ 0.14
COMMD4-202ENST00000338995 RARS2Q5T160 578 aaKnown RBP15.94■□□□□ 0.14
COMMD4-202ENST00000338995 RUFY3Q7L099 469 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms