RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 IFIH1Q9BYX4 1025 aaKnown RBP12.13□□□□□ -0.47
LRP1-202ENST00000338962 TSGA10Q9BZW7 698 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 GBP3Q9H0R5 595 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 CYP39A1Q9NYL5 469 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 TSKSQ9UJT2 592 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 CDC23Q9UJX2 597 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 ZHX1Q9UKY1 873 aaPredicted RBP12.13□□□□□ -0.47
LRP1-202ENST00000338962 COL11A1P12107 1806 aaPredicted RBP12.13□□□□□ -0.47
LRP1-202ENST00000338962 HSPA8P11142 646 aaKnown RBP12.12□□□□□ -0.47
LRP1-202ENST00000338962 PSMC2P35998 433 aaKnown RBP12.12□□□□□ -0.47
LRP1-202ENST00000338962 EIF4A3P38919 411 aaKnown RBP12.12□□□□□ -0.47
LRP1-202ENST00000338962 PSMC5P62195 406 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 MAPK7Q13164 816 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 KCTD2Q14681 263 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 NFIL3Q16649 462 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 EXOC3L4Q17RC7 722 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 SFMBT2Q5VUG0 894 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 C4orf19Q8IY42 314 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 SYCP3Q8IZU3 236 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 DAW1Q8N136 415 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 MMP19Q99542 508 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 ARHGAP39Q9C0H5 1083 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 TFR2Q9UP52 801 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 IVNS1ABPQ9Y6Y0 642 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 PFASO15067 1338 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 K7ENM7 598 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 TNPO2O14787 897 aaKnown RBP12.12□□□□□ -0.47
LRP1-202ENST00000338962 USO1O60763 962 aaKnown RBP12.12□□□□□ -0.47
LRP1-202ENST00000338962 CCNE2O96020 404 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 HOXC6P09630 235 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 CTCFP49711 727 aaPredicted RBP12.12□□□□□ -0.47
LRP1-202ENST00000338962 ARHGEF6Q15052 776 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 KSR1Q8IVT5 923 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 FAM186BQ8IYM0 893 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 ANKRD35Q8N283 1001 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 SOCS4Q8WXH5 440 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 SLC35C1Q96A29 364 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 INPP4AQ96PE3 977 aaPredicted RBP12.12□□□□□ -0.47
LRP1-202ENST00000338962 LACRTQ9GZZ8 138 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 FRMD4BQ9Y2L6 1034 aa12.12□□□□□ -0.47
LRP1-202ENST00000338962 SSU72P8A0A1W2PR75 194 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 RCCD1A6NED2 376 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 ZNF263O14978 683 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 ADORA2AP29274 412 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 ALCAMQ13740 583 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 RAPGEF1Q13905 1077 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 UGCGQ16739 394 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 WDR78Q5VTH9 848 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 ZNF746Q6NUN9 644 aaPredicted RBP12.11□□□□□ -0.47
LRP1-202ENST00000338962 TRMT1LQ7Z2T5 733 aaKnown RBP12.11□□□□□ -0.47
LRP1-202ENST00000338962 GPIHBP1Q8IV16 184 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 CEP112Q8N8E3 955 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 FAM133AQ8N9E0 248 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 RDM1Q8NG50 284 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 CD99L2Q8TCZ2 262 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 CDHR1Q96JP9 859 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 DRC1Q96MC2 740 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 MKNK1Q9BUB5 465 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 IKZF4Q9H2S9 585 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 AGPAT3Q9NRZ7 376 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 DIS3Q9Y2L1 958 aaKnown RBP12.11□□□□□ -0.47
LRP1-202ENST00000338962 PCDHA13Q9Y5I0 950 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 MYH11P35749 1972 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 MACROD2A1Z1Q3 448 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 PPP1R37O75864 691 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 LCA5LO95447 670 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 SERPING1P05155 500 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 HOXD10P28358 340 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 CYP2J2P51589 502 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 APBA1Q02410 837 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 GABPB1Q06547 395 aaPredicted RBP12.11□□□□□ -0.47
LRP1-202ENST00000338962 MAPK8IP2Q13387 824 aaPredicted RBP12.11□□□□□ -0.47
LRP1-202ENST00000338962 ZNF792Q3KQV3 632 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 GNPTABQ3T906 1256 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 HGSNATQ68CP4 663 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 FBXO38Q6PIJ6 1188 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 GBP6Q6ZN66 633 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 TXLNBQ8N3L3 684 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 SECISBP2LQ93073 1101 aaKnown RBP12.11□□□□□ -0.47
LRP1-202ENST00000338962 SH2D3AQ9BRG2 576 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 TIPINQ9BVW5 301 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 TMEM206Q9H813 350 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 PLCB1Q9NQ66 1216 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 PRDM10Q9NQV6 1147 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 TMEM51Q9NW97 253 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 PCDHA10Q9Y5I2 948 aa12.11□□□□□ -0.47
LRP1-202ENST00000338962 BACH1O14867 736 aa12.1□□□□□ -0.47
LRP1-202ENST00000338962 STAM2O75886 525 aa12.1□□□□□ -0.47
LRP1-202ENST00000338962 MAPTP10636 758 aaKnown RBP12.1□□□□□ -0.47
LRP1-202ENST00000338962 PLS3P13797 630 aa12.1□□□□□ -0.47
LRP1-202ENST00000338962 PRMT2P55345 433 aa12.1□□□□□ -0.47
LRP1-202ENST00000338962 CHMP4BP1P59074 171 aa12.1□□□□□ -0.47
LRP1-202ENST00000338962 MAP2K5Q13163 448 aa12.1□□□□□ -0.47
LRP1-202ENST00000338962 XKR9Q5GH70 373 aa12.1□□□□□ -0.47
LRP1-202ENST00000338962 SRGAP1Q7Z6B7 1085 aa12.1□□□□□ -0.47
LRP1-202ENST00000338962 GOLGA1Q92805 767 aa12.1□□□□□ -0.47
LRP1-202ENST00000338962 SPAG5Q96R06 1193 aa12.1□□□□□ -0.47
LRP1-202ENST00000338962 GANQ9H2C0 597 aa12.1□□□□□ -0.47
LRP1-202ENST00000338962 LUC7LQ9NQ29 371 aaKnown RBP12.1□□□□□ -0.47
LRP1-202ENST00000338962 GCNT4Q9P109 453 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms