RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 DISC1Q9NRI5 854 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 NAP1L2Q9ULW6 460 aaPredicted RBP12.98□□□□□ -0.33
CSMD2-202ENST00000338325 C2orf16Q68DN1 1984 aa12.98□□□□□ -0.33
CSMD2-202ENST00000338325 CCDC196A0A1B0GTZ2 297 aa12.97□□□□□ -0.33
CSMD2-202ENST00000338325 CARNS1A5YM72 827 aa12.97□□□□□ -0.33
CSMD2-202ENST00000338325 ZC3H11AO75152 810 aaKnown RBP eCLIP12.97□□□□□ -0.33
CSMD2-202ENST00000338325 GNA11P29992 359 aa12.97□□□□□ -0.33
CSMD2-202ENST00000338325 ADD1P35611 737 aaKnown RBP12.97□□□□□ -0.33
CSMD2-202ENST00000338325 NBL1P41271 181 aa12.97□□□□□ -0.33
CSMD2-202ENST00000338325 POLGP54098 1239 aaPredicted RBP12.97□□□□□ -0.33
CSMD2-202ENST00000338325 TBC1D8BQ0IIM8 1120 aa12.97□□□□□ -0.33
CSMD2-202ENST00000338325 GIT2Q14161 759 aa12.97□□□□□ -0.33
CSMD2-202ENST00000338325 UGCGQ16739 394 aa12.97□□□□□ -0.33
CSMD2-202ENST00000338325 ADCK5Q3MIX3 580 aa12.97□□□□□ -0.33
CSMD2-202ENST00000338325 ASTLQ6HA08 431 aaPredicted RBP12.97□□□□□ -0.33
CSMD2-202ENST00000338325 ASCL5Q7RTU5 278 aa12.97□□□□□ -0.33
CSMD2-202ENST00000338325 PLCD3Q8N3E9 789 aa12.97□□□□□ -0.33
CSMD2-202ENST00000338325 C12orf76Q8N812 135 aaPredicted RBP12.97□□□□□ -0.33
CSMD2-202ENST00000338325 TMEM87AQ8NBN3 555 aa12.97□□□□□ -0.33
CSMD2-202ENST00000338325 CHST12Q9NRB3 414 aa12.97□□□□□ -0.33
CSMD2-202ENST00000338325 DBR1Q9UK59 544 aaKnown RBP12.97□□□□□ -0.33
CSMD2-202ENST00000338325 USTQ9Y2C2 406 aa12.97□□□□□ -0.33
CSMD2-202ENST00000338325 IRAK3Q9Y616 596 aa12.97□□□□□ -0.33
CSMD2-202ENST00000338325 PRR23AA6NEV1 266 aa12.96□□□□□ -0.33
CSMD2-202ENST00000338325 CTSAP10619 480 aa12.96□□□□□ -0.33
CSMD2-202ENST00000338325 EPCAMP16422 314 aa12.96□□□□□ -0.33
CSMD2-202ENST00000338325 SFNP31947 248 aa12.96□□□□□ -0.33
CSMD2-202ENST00000338325 PHKA2P46019 1235 aa12.96□□□□□ -0.33
CSMD2-202ENST00000338325 KRT32Q14532 448 aa12.96□□□□□ -0.33
CSMD2-202ENST00000338325 TSGA10IPQ3SY00 556 aa12.96□□□□□ -0.33
CSMD2-202ENST00000338325 ATAT1Q5SQI0 421 aa12.96□□□□□ -0.33
CSMD2-202ENST00000338325 TMEM173Q86WV6 379 aaPredicted RBP12.96□□□□□ -0.33
CSMD2-202ENST00000338325 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
CSMD2-202ENST00000338325 BICD2Q8TD16 824 aa12.96□□□□□ -0.33
CSMD2-202ENST00000338325 AUTS2Q8WXX7 1259 aa12.96□□□□□ -0.33
CSMD2-202ENST00000338325 TRAIPQ9BWF2 469 aa12.96□□□□□ -0.33
CSMD2-202ENST00000338325 GCOM2Q9BZD3 368 aaPredicted RBP12.96□□□□□ -0.33
CSMD2-202ENST00000338325 MFSD1Q9H3U5 465 aa12.96□□□□□ -0.33
CSMD2-202ENST00000338325 LIMD1Q9UGP4 676 aa12.96□□□□□ -0.33
CSMD2-202ENST00000338325 NID2Q14112 1375 aa12.95□□□□□ -0.34
CSMD2-202ENST00000338325 MSH4O15457 936 aa12.95□□□□□ -0.34
CSMD2-202ENST00000338325 CHMP2AO43633 222 aa12.95□□□□□ -0.34
CSMD2-202ENST00000338325 CSDE1O75534 798 aaKnown RBP12.95□□□□□ -0.34
CSMD2-202ENST00000338325 SFPQP23246 707 aaKnown RBP eCLIP12.95□□□□□ -0.34
CSMD2-202ENST00000338325 CLCN5P51795 746 aa12.95□□□□□ -0.34
CSMD2-202ENST00000338325 JAK3P52333 1124 aa12.95□□□□□ -0.34
CSMD2-202ENST00000338325 FGD1P98174 961 aa12.95□□□□□ -0.34
CSMD2-202ENST00000338325 CDC42EP1Q00587 391 aa12.95□□□□□ -0.34
CSMD2-202ENST00000338325 TARBP2Q15633 366 aaKnown RBP12.95□□□□□ -0.34
CSMD2-202ENST00000338325 KANK3Q6NY19 840 aa12.95□□□□□ -0.34
CSMD2-202ENST00000338325 DDX53Q86TM3 631 aaKnown RBP12.95□□□□□ -0.34
CSMD2-202ENST00000338325 SLC22A17Q8WUG5 538 aa12.95□□□□□ -0.34
CSMD2-202ENST00000338325 IGSF21Q96ID5 467 aa12.95□□□□□ -0.34
CSMD2-202ENST00000338325 RIT2Q99578 217 aa12.95□□□□□ -0.34
CSMD2-202ENST00000338325 TEKT3Q9BXF9 490 aa12.95□□□□□ -0.34
CSMD2-202ENST00000338325 PRPF3O43395 683 aaKnown RBP12.94□□□□□ -0.34
CSMD2-202ENST00000338325 GAS7O60861 476 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 HMGB1P09429 215 aaKnown RBP12.94□□□□□ -0.34
CSMD2-202ENST00000338325 SKIP12755 728 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 IRX6P78412 446 aaPredicted RBP12.94□□□□□ -0.34
CSMD2-202ENST00000338325 FOXK2Q01167 660 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 DRP2Q13474 957 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 MTERF2Q49AM1 385 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 LRCH2Q5VUJ6 765 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 TWF2Q6IBS0 349 aaKnown RBP12.94□□□□□ -0.34
CSMD2-202ENST00000338325 GLB1LQ6UWU2 654 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 CABP7Q86V35 215 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 CCDC148Q8NFR7 591 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 BCL7CQ8WUZ0 217 aaPredicted RBP12.94□□□□□ -0.34
CSMD2-202ENST00000338325 SLC5A5Q92911 643 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 LPPQ93052 612 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 CCDC136Q96JN2 1154 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 UNC45AQ9H3U1 944 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 NRDE2Q9H7Z3 1164 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 SFXN1Q9H9B4 322 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 CYP26B1Q9NR63 512 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 TBC1D13Q9NVG8 400 aa12.94□□□□□ -0.34
CSMD2-202ENST00000338325 SEPT9Q9UHD8 586 aaPredicted RBP12.94□□□□□ -0.34
CSMD2-202ENST00000338325 A0A087WZ62 844 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 GALTP07902 379 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 RAB27AP51159 221 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 BMP2KLQ5H9B9 411 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 NOMO2Q5JPE7 1267 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 CWF19L1Q69YN2 538 aaKnown RBP12.93□□□□□ -0.34
CSMD2-202ENST00000338325 TMC5Q6UXY8 1006 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 ZNF410Q86VK4 478 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 PPFIBP1Q86W92 1011 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 RDM1Q8NG50 284 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 PHKBQ93100 1093 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 ACSF2Q96CM8 615 aaPredicted RBP12.93□□□□□ -0.34
CSMD2-202ENST00000338325 FDXACB1Q9BRP7 624 aaPredicted RBP12.93□□□□□ -0.34
CSMD2-202ENST00000338325 NIFKQ9BYG3 293 aaKnown RBP12.93□□□□□ -0.34
CSMD2-202ENST00000338325 INO80BQ9C086 356 aaPredicted RBP12.93□□□□□ -0.34
CSMD2-202ENST00000338325 PIN4Q9Y237 131 aaKnown RBP12.93□□□□□ -0.34
CSMD2-202ENST00000338325 INPP5FQ9Y2H2 1132 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 IGKV6-21A0A0C4DH24 114 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 EDIL3O43854 480 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 DNM2P50570 870 aa12.93□□□□□ -0.34
CSMD2-202ENST00000338325 USP11P51784 963 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms