RNA–Protein interactions for RNA: ENST00000337907.7

RERE-201, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 8,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-201ENST00000337907 AFF4Q9UHB7 1163 aaKnown RBP13.55□□□□□ -0.24
RERE-201ENST00000337907 A0A1W2PP64 1363 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 MMEP08473 750 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 NCALDP61601 193 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 TRIM71Q2Q1W2 868 aaKnown RBP13.54□□□□□ -0.24
RERE-201ENST00000337907 C16orf62Q7Z3J2 963 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 TBC1D1Q86TI0 1168 aaPredicted RBP13.54□□□□□ -0.24
RERE-201ENST00000337907 PLD3Q8IV08 490 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.54□□□□□ -0.24
RERE-201ENST00000337907 AIPL1Q9NZN9 384 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 NOVA2Q9UNW9 492 aaKnown RBP13.54□□□□□ -0.24
RERE-201ENST00000337907 UGGT2Q9NYU1 1516 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 IKBKBO14920 756 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 LZTS3O60299 673 aaPredicted RBP13.54□□□□□ -0.24
RERE-201ENST00000337907 TOMM70O94826 608 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 RALAP11233 206 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 BCAMP50895 628 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 ADCK1Q86TW2 530 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 NLGN1Q8N2Q7 840 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 ANKRD13CQ8N6S4 541 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 MB21D1Q8N884 522 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 TNIP2Q8NFZ5 429 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 GEMIN8Q9NWZ8 242 aaKnown RBP13.54□□□□□ -0.24
RERE-201ENST00000337907 C6orf203Q9P0P8 240 aaPredicted RBP13.54□□□□□ -0.24
RERE-201ENST00000337907 CXCR5P32302 372 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 LRRC8EQ6NSJ5 796 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 GOLPH3LQ9H4A5 285 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 NCKAP5LQ9HCH0 1330 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 NBNO60934 754 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 TBXAS1P24557 533 aaPredicted RBP13.54□□□□□ -0.24
RERE-201ENST00000337907 TAS2R42Q7RTR8 314 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 KRCC1Q9NPI7 259 aaPredicted RBP13.54□□□□□ -0.24
RERE-201ENST00000337907 PCDHA7Q9UN72 937 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 COL17A1Q9UMD9 1497 aaPredicted RBP13.54□□□□□ -0.24
RERE-201ENST00000337907 CCDC188H7C350 402 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 HDLBPQ00341 1268 aaKnown RBP13.54□□□□□ -0.24
RERE-201ENST00000337907 AP1B1Q10567 949 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 CC2D2BQ6DHV5 1058 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 CC2D1AQ6P1N0 951 aaPredicted RBP13.54□□□□□ -0.24
RERE-201ENST00000337907 TTLL11Q8NHH1 800 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 ECT2Q9H8V3 914 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 CARMIL3Q8ND23 1372 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 UHRF1BP1Q6BDS2 1440 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 ALDH1A1P00352 501 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 LAMB3Q13751 1172 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 KRT24Q2M2I5 525 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 KIRREL3Q8IZU9 778 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 TDRD7Q8NHU6 1098 aaKnown RBP13.54□□□□□ -0.24
RERE-201ENST00000337907 SLC10A4Q96EP9 437 aa13.54□□□□□ -0.24
RERE-201ENST00000337907 KYAT1Q16773 422 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 PHKG1Q16816 387 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 ZNF827Q17R98 1081 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 HEATR6Q6AI08 1181 aaKnown RBP13.53□□□□□ -0.24
RERE-201ENST00000337907 SPATA16Q9BXB7 569 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 VPS11Q9H270 941 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 SESN1Q9Y6P5 492 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 HPCAP84074 193 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 ANO4Q32M45 955 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 TWF2Q6IBS0 349 aaKnown RBP13.53□□□□□ -0.24
RERE-201ENST00000337907 CHMP1BQ7LBR1 199 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 COA7Q96BR5 231 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 PLEKHA8Q96JA3 519 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 NDUFB9Q9Y6M9 179 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 A0A1W2PQ27 194 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 A0A1W2PQ64 194 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 A0A1W2PQD8 194 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 PRAG1Q86YV5 1406 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 CLIC6Q96NY7 704 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 USP28Q96RU2 1077 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 USP19O94966 1318 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 MAP3K19Q56UN5 1328 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 UBXN2AP68543 259 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 CHRNDQ07001 517 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 SKIV2LQ15477 1246 aaKnown RBP13.53□□□□□ -0.24
RERE-201ENST00000337907 TBC1D10BQ4KMP7 808 aaPredicted RBP13.53□□□□□ -0.24
RERE-201ENST00000337907 ARMC2Q8NEN0 867 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 CLIC4Q9Y696 253 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 FTCDO95954 541 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 PLA2G4BP0C869 781 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 C4BPBP20851 252 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 LUZP2Q86TE4 346 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 EMILIN3Q9NT22 766 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 MAD2L2Q9UI95 211 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 CLDN3O15551 220 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 CYBBP04839 570 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 KCNA2P16389 499 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 LSG1Q9H089 658 aaKnown RBP13.53□□□□□ -0.24
RERE-201ENST00000337907 DDX56Q9NY93 547 aaKnown RBP13.53□□□□□ -0.24
RERE-201ENST00000337907 HEY1Q9Y5J3 304 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 UBA6A0AVT1 1052 aaPredicted RBP13.53□□□□□ -0.24
RERE-201ENST00000337907 BTBD18B2RXH4 712 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 GSPT1P15170 499 aaKnown RBP13.53□□□□□ -0.24
RERE-201ENST00000337907 CCDC142Q17RM4 750 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 HIBCHQ6NVY1 386 aaPredicted RBP13.53□□□□□ -0.24
RERE-201ENST00000337907 EMBQ6PCB8 327 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 TBCKQ8TEA7 893 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 MRGBPQ9NV56 204 aa13.53□□□□□ -0.24
RERE-201ENST00000337907 FAM135BQ49AJ0 1406 aa13.52□□□□□ -0.24
RERE-201ENST00000337907 UBE4BO95155 1302 aa13.52□□□□□ -0.24
RERE-201ENST00000337907 CCDC22O60826 627 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms