RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 SRGAP2CP0DJJ0 459 aa16.63■□□□□ 0.25
KATNA1-201ENST00000335643 ATF7P17544 494 aaPredicted RBP16.63■□□□□ 0.25
KATNA1-201ENST00000335643 CDC25AP30304 524 aa16.63■□□□□ 0.25
KATNA1-201ENST00000335643 IGSF22Q8N9C0 903 aa16.63■□□□□ 0.25
KATNA1-201ENST00000335643 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
KATNA1-201ENST00000335643 LRFN2Q9ULH4 789 aa16.63■□□□□ 0.25
KATNA1-201ENST00000335643 PCDHB7Q9Y5E2 793 aa16.63■□□□□ 0.25
KATNA1-201ENST00000335643 H3BNC9 293 aa16.62■□□□□ 0.25
KATNA1-201ENST00000335643 USO1O60763 962 aaKnown RBP16.62■□□□□ 0.25
KATNA1-201ENST00000335643 CTNNB1P35222 781 aa16.62■□□□□ 0.25
KATNA1-201ENST00000335643 RILPL1Q5EBL4 403 aa16.62■□□□□ 0.25
KATNA1-201ENST00000335643 CMTR2Q8IYT2 770 aaKnown RBP16.62■□□□□ 0.25
KATNA1-201ENST00000335643 RNF149Q8NC42 400 aa16.62■□□□□ 0.25
KATNA1-201ENST00000335643 ATP6V0A4Q9HBG4 840 aa16.62■□□□□ 0.25
KATNA1-201ENST00000335643 GPRC5CQ9NQ84 441 aa16.62■□□□□ 0.25
KATNA1-201ENST00000335643 TMEM161AQ9NX61 479 aa16.62■□□□□ 0.25
KATNA1-201ENST00000335643 LRWD1Q9UFC0 647 aa16.62■□□□□ 0.25
KATNA1-201ENST00000335643 C5orf67F2Z3F1 127 aa16.61■□□□□ 0.25
KATNA1-201ENST00000335643 K7ELQ4 463 aaPredicted RBP16.61■□□□□ 0.25
KATNA1-201ENST00000335643 GTPBP6O43824 516 aaPredicted RBP16.61■□□□□ 0.25
KATNA1-201ENST00000335643 DGAT1O75907 488 aa16.61■□□□□ 0.25
KATNA1-201ENST00000335643 ARL2P36404 184 aa16.61■□□□□ 0.25
KATNA1-201ENST00000335643 BMPR1AP36894 532 aa16.61■□□□□ 0.25
KATNA1-201ENST00000335643 ATP2C1P98194 919 aaPredicted RBP16.61■□□□□ 0.25
KATNA1-201ENST00000335643 CDC42EP1Q00587 391 aa16.61■□□□□ 0.25
KATNA1-201ENST00000335643 CAPSQ13938 189 aa16.61■□□□□ 0.25
KATNA1-201ENST00000335643 MAEAQ7L5Y9 396 aa16.61■□□□□ 0.25
KATNA1-201ENST00000335643 ZNF598Q86UK7 904 aaKnown RBP16.61■□□□□ 0.25
KATNA1-201ENST00000335643 ECHDC2Q86YB7 292 aa16.61■□□□□ 0.25
KATNA1-201ENST00000335643 EXOC8Q8IYI6 725 aa16.61■□□□□ 0.25
KATNA1-201ENST00000335643 SAMD11Q96NU1 681 aa16.61■□□□□ 0.25
KATNA1-201ENST00000335643 MMTAG2Q9BU76 263 aaKnown RBP16.61■□□□□ 0.25
KATNA1-201ENST00000335643 PIN4Q9Y237 131 aaKnown RBP16.61■□□□□ 0.25
KATNA1-201ENST00000335643 TBKBP1A7MCY6 615 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 GAS2O43903 313 aaKnown RBP16.6■□□□□ 0.25
KATNA1-201ENST00000335643 XRCC6P12956 609 aaKnown RBP eCLIP16.6■□□□□ 0.25
KATNA1-201ENST00000335643 ZSCAN20P17040 1043 aaPredicted RBP16.6■□□□□ 0.25
KATNA1-201ENST00000335643 SFPQP23246 707 aaKnown RBP eCLIP16.6■□□□□ 0.25
KATNA1-201ENST00000335643 GLRA2P23416 452 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 CCT6AP40227 531 aaKnown RBP16.6■□□□□ 0.25
KATNA1-201ENST00000335643 GPM6BQ13491 265 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 PDIA5Q14554 519 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 CLLU1OSQ5K130 101 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 ERMNQ8TAM6 284 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 TCP11Q8WWU5 503 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 NACC1Q96RE7 527 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 ELAC1Q9H777 363 aaKnown RBP16.6■□□□□ 0.25
KATNA1-201ENST00000335643 DBR1Q9UK59 544 aaKnown RBP16.6■□□□□ 0.25
KATNA1-201ENST00000335643 A0A0U1RQF3 1178 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 VPS37CA5D8V6 355 aaPredicted RBP16.6■□□□□ 0.25
KATNA1-201ENST00000335643 MEIS3P2A8K0S8 358 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 LAD1O00515 517 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 GRM6O15303 877 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 HOXA11P31270 313 aaPredicted RBP16.6■□□□□ 0.25
KATNA1-201ENST00000335643 PRPHP41219 470 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 LONRF3Q496Y0 759 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 LRRC55Q6ZSA7 311 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 CATSPER4Q7RTX7 472 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 RNF169Q8NCN4 708 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 SNX29Q8TEQ0 813 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 CASD1Q96PB1 797 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 POLR3FQ9H1D9 316 aaPredicted RBP16.6■□□□□ 0.25
KATNA1-201ENST00000335643 POLD4Q9HCU8 107 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 AGPAT5Q9NUQ2 364 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 LMCD1Q9NZU5 365 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 KIAA1024Q9UPX6 916 aa16.6■□□□□ 0.25
KATNA1-201ENST00000335643 SYT1P21579 422 aa16.59■□□□□ 0.25
KATNA1-201ENST00000335643 PHKA2P46019 1235 aa16.59■□□□□ 0.25
KATNA1-201ENST00000335643 CAMK1Q14012 370 aa16.59■□□□□ 0.25
KATNA1-201ENST00000335643 HAUS3Q68CZ6 603 aa16.59■□□□□ 0.25
KATNA1-201ENST00000335643 DTHD1Q6ZMT9 781 aa16.59■□□□□ 0.25
KATNA1-201ENST00000335643 FAM43BQ6ZT52 329 aaPredicted RBP16.59■□□□□ 0.25
KATNA1-201ENST00000335643 KCNK18Q7Z418 384 aa16.59■□□□□ 0.25
KATNA1-201ENST00000335643 SRGAP1Q7Z6B7 1085 aa16.59■□□□□ 0.25
KATNA1-201ENST00000335643 LPPQ93052 612 aa16.59■□□□□ 0.25
KATNA1-201ENST00000335643 CCDC43Q96MW1 224 aaKnown RBP16.59■□□□□ 0.25
KATNA1-201ENST00000335643 INO80BQ9C086 356 aaPredicted RBP16.59■□□□□ 0.25
KATNA1-201ENST00000335643 CWH43Q9H720 699 aa16.59■□□□□ 0.25
KATNA1-201ENST00000335643 ALG13Q9NP73 1137 aaKnown RBP16.59■□□□□ 0.25
KATNA1-201ENST00000335643 DDX19AQ9NUU7 478 aaKnown RBP16.59■□□□□ 0.25
KATNA1-201ENST00000335643 TYW1Q9NV66 732 aaKnown RBP16.59■□□□□ 0.25
KATNA1-201ENST00000335643 E9PMD0 336 aa16.58■□□□□ 0.24
KATNA1-201ENST00000335643 ASAP2O43150 1006 aa16.58■□□□□ 0.24
KATNA1-201ENST00000335643 CSPG5O95196 566 aa16.58■□□□□ 0.24
KATNA1-201ENST00000335643 DNAJB1P25685 340 aa16.58■□□□□ 0.24
KATNA1-201ENST00000335643 PTENP60484 403 aa16.58■□□□□ 0.24
KATNA1-201ENST00000335643 TFF2Q03403 129 aa16.58■□□□□ 0.24
KATNA1-201ENST00000335643 GRIN1Q05586 938 aa16.58■□□□□ 0.24
KATNA1-201ENST00000335643 MBTD1Q05BQ5 628 aa16.58■□□□□ 0.24
KATNA1-201ENST00000335643 AMHR2Q16671 573 aa16.58■□□□□ 0.24
KATNA1-201ENST00000335643 TWF2Q6IBS0 349 aaKnown RBP16.58■□□□□ 0.24
KATNA1-201ENST00000335643 FAM173BQ6P4H8 233 aa16.58■□□□□ 0.24
KATNA1-201ENST00000335643 PADI6Q6TGC4 694 aa16.58■□□□□ 0.24
KATNA1-201ENST00000335643 BSNDQ8WZ55 320 aa16.58■□□□□ 0.24
KATNA1-201ENST00000335643 MRPL38Q96DV4 380 aaKnown RBP16.58■□□□□ 0.24
KATNA1-201ENST00000335643 INTS4Q96HW7 963 aaKnown RBP16.58■□□□□ 0.24
KATNA1-201ENST00000335643 BHMT2Q9H2M3 363 aa16.58■□□□□ 0.24
KATNA1-201ENST00000335643 CHST12Q9NRB3 414 aa16.58■□□□□ 0.24
KATNA1-201ENST00000335643 MYO7AQ13402 2215 aa16.57■□□□□ 0.24
KATNA1-201ENST00000335643 VWA3AA6NCI4 1184 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms