RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 PLEKHA4Q9H4M7 779 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 AIPL1Q9NZN9 384 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 MAPK8IP1Q9UQF2 711 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 TTLL3Q9Y4R7 772 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 TLR3O15455 904 aaKnown RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 PDE9AO76083 593 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 PKN2Q16513 984 aaKnown RBP5.87□□□□□ -1.47
PTPRB-202ENST00000334414 APOA5Q6Q788 366 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 NELFCDQ8IXH7 590 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 KCTD17Q8N5Z5 321 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 FANCBQ8NB91 859 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 PCYOX1LQ8NBM8 494 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 LINC00301Q8NCQ3 95 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 ACRBPQ8NEB7 543 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 SUPT20HQ8NEM7 779 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 TSPAN17Q96FV3 270 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 ST7Q9NRC1 585 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 CDY2AQ9Y6F7 541 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 CDY1Q9Y6F8 540 aa5.87□□□□□ -1.47
PTPRB-202ENST00000334414 LGALS16A8MUM7 142 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 GHRP10912 638 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 PMS1P54277 932 aaKnown RBP5.86□□□□□ -1.47
PTPRB-202ENST00000334414 UBE3CQ15386 1083 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 FAM102BQ5T8I3 360 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 PROCA1Q8NCQ7 364 aaPredicted RBP5.86□□□□□ -1.47
PTPRB-202ENST00000334414 SEPT1Q8WYJ6 367 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 PPP1R14BQ96C90 147 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 CCT8L2Q96SF2 557 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 WDR11Q9BZH6 1224 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 PAPOLBQ9NRJ5 636 aaKnown RBP5.86□□□□□ -1.47
PTPRB-202ENST00000334414 UBAP1Q9NZ09 502 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 A0A1W2PQJ5 194 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 WDR64B1ANS9 1081 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 KRT20P35900 424 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 HDLBPQ00341 1268 aaKnown RBP5.86□□□□□ -1.47
PTPRB-202ENST00000334414 TAB1Q15750 504 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 FAM133AQ8N9E0 248 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 PSMD14O00487 310 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 CFLARO15519 480 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 PRPF3O43395 683 aaKnown RBP5.86□□□□□ -1.47
PTPRB-202ENST00000334414 ITGA6P23229 1130 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 TFDP2Q14188 446 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 CYP4F22Q6NT55 531 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 ARMCX2Q7L311 632 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 DNAAF3Q8N9W5 541 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 SLC26A7Q8TE54 656 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 NACC1Q96RE7 527 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 COQ7Q99807 217 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 TBK1Q9UHD2 729 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 RABGEF1Q9UJ41 708 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 AATKQ6ZMQ8 1374 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 ACTN3Q08043 901 aaPredicted RBP5.86□□□□□ -1.47
PTPRB-202ENST00000334414 ZC3H12BQ5HYM0 836 aaKnown RBP5.86□□□□□ -1.47
PTPRB-202ENST00000334414 ARMCX5Q6P1M9 558 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 KRT35Q92764 455 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 PRMT1Q99873 361 aaKnown RBP5.86□□□□□ -1.47
PTPRB-202ENST00000334414 CCDC90BQ9GZT6 254 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 TNRQ92752 1358 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 RHOBTB1O94844 696 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 TMOD1P28289 359 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 PDIA3P30101 505 aaKnown RBP5.86□□□□□ -1.47
PTPRB-202ENST00000334414 BFSP2Q13515 415 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 TMTC4Q5T4D3 741 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 ATAD3BQ5T9A4 648 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 NLRP9Q7RTR0 991 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 USP33Q8TEY7 942 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 MRPL48Q96GC5 212 aaKnown RBP5.86□□□□□ -1.47
PTPRB-202ENST00000334414 KLHL4Q9C0H6 718 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 RGL1Q9NZL6 768 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 CHMP2BQ9UQN3 213 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 TRIM24O15164 1050 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 ACSL3O95573 720 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 POLR2MP0CAP2 368 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 RXRAP19793 462 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 KRT73Q86Y46 540 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 CHURC1Q8WUH1 139 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 CYFIP2Q96F07 1278 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 BTBD7Q9P203 1132 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 PDE8AO60658 829 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 ZRANB2O95218 330 aaKnown RBP eCLIP5.86□□□□□ -1.47
PTPRB-202ENST00000334414 ITIH2P19823 946 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 HLA-DPA1P20036 260 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 MESDQ14696 234 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 NAALADL2Q58DX5 795 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 TTC16Q8NEE8 873 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 VPS54Q9P1Q0 977 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 DKK3Q9UBP4 350 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 HNRNPDLO14979 420 aaKnown RBP5.86□□□□□ -1.47
PTPRB-202ENST00000334414 DCTN2Q13561 401 aaKnown RBP5.86□□□□□ -1.47
PTPRB-202ENST00000334414 TNFAIP1Q13829 316 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 UGP2Q16851 508 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 ARMC3Q5W041 872 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 MTHFD1LQ6UB35 978 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 PIK3R5Q8WYR1 880 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 CDHR1Q96JP9 859 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 PRRG3Q9BZD7 231 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 VPS33BQ9H267 617 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 DCLRE1BQ9H816 532 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 ZNF532Q9HCE3 1301 aa5.86□□□□□ -1.47
PTPRB-202ENST00000334414 POTEFA5A3E0 1075 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms