RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 NKRFO15226 690 aaKnown RBP eCLIP12.08□□□□□ -0.48
POLR1B-202ENST00000333990 ONECUT3O60422 494 aaPredicted RBP12.08□□□□□ -0.48
POLR1B-202ENST00000333990 RHBDL3P58872 404 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 FKBP1BP68106 108 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 TOGARAM2Q6ZUX3 1019 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 ZNF142P52746 1687 aaPredicted RBP12.08□□□□□ -0.48
POLR1B-202ENST00000333990 RIC1Q4ADV7 1423 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 H7C0C1 242 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 SLC16A3O15427 465 aaKnown RBP12.08□□□□□ -0.48
POLR1B-202ENST00000333990 MFAP3LO75121 409 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 NDUFA10O95299 355 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 ATP5OP48047 213 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 EDRF1Q3B7T1 1238 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 RNF187Q5TA31 235 aaPredicted RBP12.08□□□□□ -0.48
POLR1B-202ENST00000333990 NHEJ1Q9H9Q4 299 aaPredicted RBP12.08□□□□□ -0.48
POLR1B-202ENST00000333990 HOMER3Q9NSC5 361 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.08□□□□□ -0.48
POLR1B-202ENST00000333990 A6NNZ2 444 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 GIPC1O14908 333 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 PRPSAP2O60256 369 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 TBC1D12O60347 775 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 HOXC6P09630 235 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 PRR29P0C7W0 189 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 SLC12A2P55011 1212 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 ACTR2P61160 394 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 ZBTB16Q05516 673 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 TUBB8Q3ZCM7 444 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 ARRDC4Q8NCT1 418 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 CAMKK2Q96RR4 588 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 ADAMTS1Q9UHI8 967 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 PASKQ96RG2 1323 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 IGSF9BQ9UPX0 1349 aa12.08□□□□□ -0.48
POLR1B-202ENST00000333990 ADM5C9JUS6 153 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 KPNA6O60684 536 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 ADCY8P40145 1251 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 KCNJ6P48051 423 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 CBX1P83916 185 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 TRIM72Q6ZMU5 477 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 ANKS4BQ8N8V4 417 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 PCSK9Q8NBP7 692 aaKnown RBP12.07□□□□□ -0.48
POLR1B-202ENST00000333990 KIF12Q96FN5 646 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 TRIM7Q9C029 511 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 POLD4Q9HCU8 107 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 PDHXO00330 501 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 CALB1P05937 261 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 CYP11B2P19099 503 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 NMT1P30419 496 aaKnown RBP12.07□□□□□ -0.48
POLR1B-202ENST00000333990 PHBP35232 272 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 PRPSAP1Q14558 356 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 REEP2Q9BRK0 252 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 PDCD2LQ9BRP1 358 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 TMEM60Q9H2L4 133 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 ADAM22Q9P0K1 906 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 EIF3DO15371 548 aaKnown RBP eCLIP12.07□□□□□ -0.48
POLR1B-202ENST00000333990 MSH4O15457 936 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 PPIL2Q13356 520 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 BZW1Q7L1Q6 419 aaKnown RBP12.07□□□□□ -0.48
POLR1B-202ENST00000333990 TMEM143Q96AN5 459 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 SAAL1Q96ER3 474 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 TNIP3Q96KP6 325 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 A0A1W2PQC6 194 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 RIOK3O14730 519 aaKnown RBP12.07□□□□□ -0.48
POLR1B-202ENST00000333990 ZNF484Q5JVG2 852 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 PCNX4Q63HM2 1172 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 METTL16Q86W50 562 aaKnown RBP12.07□□□□□ -0.48
POLR1B-202ENST00000333990 ELOA2Q8IYF1 753 aaPredicted RBP12.07□□□□□ -0.48
POLR1B-202ENST00000333990 ATP2A3Q93084 1043 aa12.07□□□□□ -0.48
POLR1B-202ENST00000333990 DDX41Q9UJV9 622 aaKnown RBP12.07□□□□□ -0.48
POLR1B-202ENST00000333990 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.06□□□□□ -0.48
POLR1B-202ENST00000333990 RPS6KA5O75582 802 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 TCF7P36402 384 aaPredicted RBP12.06□□□□□ -0.48
POLR1B-202ENST00000333990 PPP2R5DQ14738 602 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 TMEM270Q6UE05 265 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 LRP10Q7Z4F1 713 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 RFX6Q8HWS3 928 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 ELMOD1Q8N336 334 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 C17orf53Q8N3J3 647 aaPredicted RBP12.06□□□□□ -0.48
POLR1B-202ENST00000333990 SYTL5Q8TDW5 730 aaPredicted RBP12.06□□□□□ -0.48
POLR1B-202ENST00000333990 PPP2R3CQ969Q6 453 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 MKL1Q969V6 931 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 TRIM62Q9BVG3 475 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 PPANQ9NQ55 473 aaKnown RBP12.06□□□□□ -0.48
POLR1B-202ENST00000333990 PLCB1Q9NQ66 1216 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 KCNQ5Q9NR82 932 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 ITKQ08881 620 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 BSPRYQ5W0U4 402 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 CERS5Q8N5B7 392 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 SMC1BQ8NDV3 1235 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 FAM76AQ8TAV0 307 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 SOCS4Q8WXH5 440 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 ZNF668Q96K58 619 aaPredicted RBP12.06□□□□□ -0.48
POLR1B-202ENST00000333990 LBHD1Q9BQE6 289 aaPredicted RBP12.06□□□□□ -0.48
POLR1B-202ENST00000333990 MKNK1Q9BUB5 465 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 FAM198AQ9UFP1 575 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 CDC23Q9UJX2 597 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 JRKLQ9Y4A0 524 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 SHPRHQ149N8 1683 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 LMO7Q8WWI1 1683 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 VWA5AO00534 786 aa12.06□□□□□ -0.48
POLR1B-202ENST00000333990 SRGAP2BP0DMP2 458 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms