RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 BAP1Q92560 729 aa12.78□□□□□ -0.36
LIMK2-202ENST00000333611 LAD1O00515 517 aa12.77□□□□□ -0.36
LIMK2-202ENST00000333611 IMPDH2P12268 514 aa12.77□□□□□ -0.36
LIMK2-202ENST00000333611 RASA1P20936 1047 aa12.77□□□□□ -0.36
LIMK2-202ENST00000333611 CDK8P49336 464 aa12.77□□□□□ -0.36
LIMK2-202ENST00000333611 ERVK-9P63128 1117 aa12.77□□□□□ -0.36
LIMK2-202ENST00000333611 IFI35P80217 286 aaPredicted RBP12.77□□□□□ -0.36
LIMK2-202ENST00000333611 ZRSR2Q15696 482 aaKnown RBP12.77□□□□□ -0.36
LIMK2-202ENST00000333611 FBXO33Q7Z6M2 555 aa12.77□□□□□ -0.36
LIMK2-202ENST00000333611 TTC8Q8TAM2 541 aa12.77□□□□□ -0.36
LIMK2-202ENST00000333611 MORC4Q8TE76 937 aa12.77□□□□□ -0.36
LIMK2-202ENST00000333611 LRRC4CQ9HCJ2 640 aa12.77□□□□□ -0.36
LIMK2-202ENST00000333611 KLHL14Q9P2G3 628 aa12.77□□□□□ -0.36
LIMK2-202ENST00000333611 TBK1Q9UHD2 729 aa12.77□□□□□ -0.36
LIMK2-202ENST00000333611 LMTK3Q96Q04 1460 aa12.77□□□□□ -0.36
LIMK2-202ENST00000333611 ALS2Q96Q42 1657 aa12.77□□□□□ -0.36
LIMK2-202ENST00000333611 ZNF335Q9H4Z2 1342 aaPredicted RBP12.77□□□□□ -0.37
LIMK2-202ENST00000333611 A0A1W2PQJ5 194 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 POTEB3A0JP26 581 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 POTECB2RU33 542 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 SLC9A1P19634 815 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 SERPINB3P29508 390 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 VPS41P49754 854 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 MCL1Q07820 350 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 SETDB1Q15047 1291 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 KBTBD12Q3ZCT8 623 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 DENND2CQ68D51 928 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 LMBRD2Q68DH5 695 aaPredicted RBP12.77□□□□□ -0.37
LIMK2-202ENST00000333611 POTEBQ6S5H4 581 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 MTHFD1LQ6UB35 978 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 TMEM110Q86TL2 294 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 LRRC8CQ8TDW0 803 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 ERLEC1Q96DZ1 483 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 TRIM51Q9BSJ1 452 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 PCDHB13Q9Y5F0 798 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 COL18A1P39060 1754 aa12.77□□□□□ -0.37
LIMK2-202ENST00000333611 CLIC2O15247 247 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 TLR2O60603 784 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 SERPING1P05155 500 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 CYP4A11Q02928 519 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 BIRC3Q13489 604 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 MYBPC3Q14896 1274 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 LRRC36Q1X8D7 754 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 PEX26Q7Z412 305 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 ZSCAN29Q8IWY8 852 aaPredicted RBP12.76□□□□□ -0.37
LIMK2-202ENST00000333611 RAD54LQ92698 747 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 ZMYND12Q9H0C1 365 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 HAO1Q9UJM8 370 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 PCDHA12Q9UN75 941 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 FOXO6A8MYZ6 492 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 ATP9AO75110 1047 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 NR2F2P24468 414 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 MAGEA8P43361 318 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 SNAP25P60880 206 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 SEPT2Q15019 361 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 GJB7Q6PEY0 223 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 OLFML1Q6UWY5 402 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 GUF1Q8N442 669 aaKnown RBP12.76□□□□□ -0.37
LIMK2-202ENST00000333611 U2AF1L4Q8WU68 220 aaKnown RBP12.76□□□□□ -0.37
LIMK2-202ENST00000333611 P3H4Q92791 437 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 DNAJC1Q96KC8 554 aaKnown RBP12.76□□□□□ -0.37
LIMK2-202ENST00000333611 IQCGQ9H095 443 aaKnown RBP12.76□□□□□ -0.37
LIMK2-202ENST00000333611 DDX25Q9UHL0 483 aaKnown RBP12.76□□□□□ -0.37
LIMK2-202ENST00000333611 ATP6V0A2Q9Y487 856 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 TAF1P21675 1872 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 DYTNA2CJ06 578 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 SFI1A8K8P3 1242 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 NVLO15381 856 aaKnown RBP12.76□□□□□ -0.37
LIMK2-202ENST00000333611 GHRP10912 638 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 ITGA4P13612 1032 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 PABPC4Q13310 644 aaKnown RBP eCLIP12.76□□□□□ -0.37
LIMK2-202ENST00000333611 ECM1Q16610 540 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 LACTB2Q53H82 288 aaPredicted RBP12.76□□□□□ -0.37
LIMK2-202ENST00000333611 TTBK2Q6IQ55 1244 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 KCTD1Q719H9 257 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 TEX9Q8N6V9 391 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 STMN2Q93045 179 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 RBM17Q96I25 401 aaKnown RBP12.76□□□□□ -0.37
LIMK2-202ENST00000333611 RAB17Q9H0T7 212 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 SLC12A6Q9UHW9 1150 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 PAIP2BQ9ULR5 123 aaKnown RBP12.76□□□□□ -0.37
LIMK2-202ENST00000333611 PCDHGA4Q9Y5G9 962 aa12.76□□□□□ -0.37
LIMK2-202ENST00000333611 DUOX1Q9NRD9 1551 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 YY1P25490 414 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 MAP7D3Q8IWC1 876 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 CLMNQ96JQ2 1002 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 ADAM33Q9BZ11 813 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 FAM129AQ9BZQ8 928 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 PALM3A6NDB9 673 aaPredicted RBP12.75□□□□□ -0.37
LIMK2-202ENST00000333611 A6NHS1 94 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 USP17L15C9J2P7 530 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 USP17L13C9JLJ4 530 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 USP17L11C9JVI0 530 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 USP17L18D6R9N7 530 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 USP17L22D6RA61 530 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 USP17L17D6RBQ6 530 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 USP17L19D6RCP7 530 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 USP17L20D6RJB6 530 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 TTI1O43156 1089 aa12.75□□□□□ -0.37
LIMK2-202ENST00000333611 FAM163BP0C2L3 166 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms