RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 FKTNO75072 461 aa25.58■■□□□ 1.69
TSEN54-201ENST00000333213 DUSP11O75319 330 aaKnown RBP25.58■■□□□ 1.69
TSEN54-201ENST00000333213 HOXD10P28358 340 aa25.58■■□□□ 1.69
TSEN54-201ENST00000333213 CCND3P30281 292 aaPredicted RBP25.58■■□□□ 1.69
TSEN54-201ENST00000333213 EDRF1Q3B7T1 1238 aa25.58■■□□□ 1.69
TSEN54-201ENST00000333213 MYRIPQ8NFW9 859 aa25.58■■□□□ 1.69
TSEN54-201ENST00000333213 CNOT6LQ96LI5 555 aaKnown RBP25.58■■□□□ 1.69
TSEN54-201ENST00000333213 KMT5AQ9NQR1 393 aa25.58■■□□□ 1.69
TSEN54-201ENST00000333213 ZNF215Q9UL58 517 aaPredicted RBP25.58■■□□□ 1.69
TSEN54-201ENST00000333213 F2P00734 622 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 CDC25BP30305 580 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 IGBP1P78318 339 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 NR1I3Q14994 352 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 PPP4R3CPQ6ZMV5 832 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 SUGCTQ9HAC7 445 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 TAB2Q9NYJ8 693 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 SEPT4O43236 478 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 TEX33O43247 280 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 ADCY3O60266 1144 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 C22orf31O95567 290 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 PRKAR2AP13861 404 aaKnown RBP25.57■■□□□ 1.68
TSEN54-201ENST00000333213 EEF1GP26641 437 aaKnown RBP25.57■■□□□ 1.68
TSEN54-201ENST00000333213 CNGA1P29973 690 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 STXBP4Q6ZWJ1 553 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.57■■□□□ 1.68
TSEN54-201ENST00000333213 PPP1R13LQ8WUF5 828 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 ERO1AQ96HE7 468 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 AP5M1Q9H0R1 490 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 ARHGAP28Q9P2N2 729 aa25.57■■□□□ 1.68
TSEN54-201ENST00000333213 TISP43B9A030 160 aa25.56■■□□□ 1.68
TSEN54-201ENST00000333213 CLIC2O15247 247 aa25.56■■□□□ 1.68
TSEN54-201ENST00000333213 GTF2F1P35269 517 aaKnown RBP eCLIP25.56■■□□□ 1.68
TSEN54-201ENST00000333213 SMTNP53814 917 aa25.56■■□□□ 1.68
TSEN54-201ENST00000333213 SPAG1Q07617 926 aa25.56■■□□□ 1.68
TSEN54-201ENST00000333213 ADAM9Q13443 819 aa25.56■■□□□ 1.68
TSEN54-201ENST00000333213 ZNF484Q5JVG2 852 aa25.56■■□□□ 1.68
TSEN54-201ENST00000333213 TAS1R3Q7RTX0 852 aa25.56■■□□□ 1.68
TSEN54-201ENST00000333213 PRPF31Q8WWY3 499 aaKnown RBP25.56■■□□□ 1.68
TSEN54-201ENST00000333213 VPS16Q9H269 839 aa25.56■■□□□ 1.68
TSEN54-201ENST00000333213 DENND3A2RUS2 1198 aa25.55■■□□□ 1.68
TSEN54-201ENST00000333213 HSPA6P17066 643 aa25.55■■□□□ 1.68
TSEN54-201ENST00000333213 NR2F2P24468 414 aa25.55■■□□□ 1.68
TSEN54-201ENST00000333213 CPT1AP50416 773 aa25.55■■□□□ 1.68
TSEN54-201ENST00000333213 COPB1P53618 953 aaKnown RBP25.55■■□□□ 1.68
TSEN54-201ENST00000333213 ALCAMQ13740 583 aa25.55■■□□□ 1.68
TSEN54-201ENST00000333213 FSCN1Q16658 493 aaKnown RBP25.55■■□□□ 1.68
TSEN54-201ENST00000333213 MARCH8Q5T0T0 291 aa25.55■■□□□ 1.68
TSEN54-201ENST00000333213 MAP3K21Q5TCX8 1036 aa25.55■■□□□ 1.68
TSEN54-201ENST00000333213 IFT74Q96LB3 600 aa25.55■■□□□ 1.68
TSEN54-201ENST00000333213 GBP3Q9H0R5 595 aa25.55■■□□□ 1.68
TSEN54-201ENST00000333213 TBX20Q9UMR3 447 aa25.55■■□□□ 1.68
TSEN54-201ENST00000333213 GNRH1P01148 92 aa25.55■■□□□ 1.68
TSEN54-201ENST00000333213 GJB1P08034 283 aa25.55■■□□□ 1.68
TSEN54-201ENST00000333213 CAPSQ13938 189 aa25.55■■□□□ 1.68
TSEN54-201ENST00000333213 AGPAT3Q9NRZ7 376 aa25.55■■□□□ 1.68
TSEN54-201ENST00000333213 CALUO43852 315 aaPredicted RBP25.54■■□□□ 1.68
TSEN54-201ENST00000333213 PGK1P00558 417 aa25.54■■□□□ 1.68
TSEN54-201ENST00000333213 NR3C1P04150 777 aa25.54■■□□□ 1.68
TSEN54-201ENST00000333213 KLRC1P26715 233 aa25.54■■□□□ 1.68
TSEN54-201ENST00000333213 GJA9P57773 515 aa25.54■■□□□ 1.68
TSEN54-201ENST00000333213 IER5Q5VY09 327 aa25.54■■□□□ 1.68
TSEN54-201ENST00000333213 EFCAB12Q6NXP0 572 aa25.54■■□□□ 1.68
TSEN54-201ENST00000333213 LINC01465Q8N7H1 131 aa25.54■■□□□ 1.68
TSEN54-201ENST00000333213 SLC17A8Q8NDX2 589 aa25.54■■□□□ 1.68
TSEN54-201ENST00000333213 RAET1EQ8TD07 263 aa25.54■■□□□ 1.68
TSEN54-201ENST00000333213 CEP63Q96MT8 703 aa25.54■■□□□ 1.68
TSEN54-201ENST00000333213 CTAGE1Q96RT6 745 aa25.54■■□□□ 1.68
TSEN54-201ENST00000333213 CBFA2T2O43439 604 aa25.53■■□□□ 1.68
TSEN54-201ENST00000333213 C6orf222P0C671 652 aaPredicted RBP25.53■■□□□ 1.68
TSEN54-201ENST00000333213 NAMPTP43490 491 aa25.53■■□□□ 1.68
TSEN54-201ENST00000333213 CLCN3P51790 818 aa25.53■■□□□ 1.68
TSEN54-201ENST00000333213 KIAA0753Q2KHM9 967 aa25.53■■□□□ 1.68
TSEN54-201ENST00000333213 FILIP1Q7Z7B0 1213 aa25.53■■□□□ 1.68
TSEN54-201ENST00000333213 MAP4K3Q8IVH8 894 aa25.53■■□□□ 1.68
TSEN54-201ENST00000333213 ACCSQ96QU6 501 aa25.53■■□□□ 1.68
TSEN54-201ENST00000333213 TUBGCP2Q9BSJ2 902 aa25.53■■□□□ 1.68
TSEN54-201ENST00000333213 TMEM206Q9H813 350 aa25.53■■□□□ 1.68
TSEN54-201ENST00000333213 MAGEC2Q9UBF1 373 aaPredicted RBP25.53■■□□□ 1.68
TSEN54-201ENST00000333213 HAS3O00219 553 aa25.53■■□□□ 1.68
TSEN54-201ENST00000333213 GAS2O43903 313 aaKnown RBP25.53■■□□□ 1.68
TSEN54-201ENST00000333213 HMGCRP04035 888 aa25.53■■□□□ 1.68
TSEN54-201ENST00000333213 NFIL3Q16649 462 aa25.53■■□□□ 1.68
TSEN54-201ENST00000333213 FAM114A1Q8IWE2 563 aa25.53■■□□□ 1.68
TSEN54-201ENST00000333213 SYCP3Q8IZU3 236 aa25.53■■□□□ 1.68
TSEN54-201ENST00000333213 PXYLP1Q8TE99 480 aa25.53■■□□□ 1.68
TSEN54-201ENST00000333213 COL1A2P08123 1366 aa25.52■■□□□ 1.68
TSEN54-201ENST00000333213 FGFR1OPO95684 399 aaKnown RBP25.52■■□□□ 1.68
TSEN54-201ENST00000333213 MYL3P08590 195 aa25.52■■□□□ 1.68
TSEN54-201ENST00000333213 CASP4P49662 377 aa25.52■■□□□ 1.68
TSEN54-201ENST00000333213 PURAQ00577 322 aaKnown RBP25.52■■□□□ 1.68
TSEN54-201ENST00000333213 PPFIA1Q13136 1202 aa25.52■■□□□ 1.68
TSEN54-201ENST00000333213 HIC1Q14526 733 aa25.52■■□□□ 1.68
TSEN54-201ENST00000333213 GRIK4Q16099 956 aa25.52■■□□□ 1.68
TSEN54-201ENST00000333213 MIIPQ5JXC2 388 aa25.52■■□□□ 1.68
TSEN54-201ENST00000333213 EXOC8Q8IYI6 725 aa25.52■■□□□ 1.68
TSEN54-201ENST00000333213 METTL13Q8N6R0 699 aa25.52■■□□□ 1.68
TSEN54-201ENST00000333213 UPF3AQ9H1J1 476 aaKnown RBP25.52■■□□□ 1.68
TSEN54-201ENST00000333213 DMAC2Q9NW81 257 aa25.52■■□□□ 1.68
TSEN54-201ENST00000333213 SUCLA2Q9P2R7 463 aaPredicted RBP25.52■■□□□ 1.68
TSEN54-201ENST00000333213 LRRIQ4A6NIV6 560 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms