RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 COL14A1Q05707 1796 aaKnown RBP9.03□□□□□ -0.96
SKA2-201ENST00000330137 A0A087X0T9 212 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 GSG1L2A8MUP6 293 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 A8MXQ7 604 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 KIAA0391O15091 583 aaKnown RBP9.03□□□□□ -0.96
SKA2-201ENST00000330137 CYP27B1O15528 508 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 ATP9BO43861 1147 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 CSF1RP07333 972 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 FAM228BP0C875 321 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 SCG2P13521 617 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 RASA1P20936 1047 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 SLC34A1Q06495 639 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 MAPK7Q13164 816 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 TRIM28Q13263 835 aaKnown RBP9.03□□□□□ -0.96
SKA2-201ENST00000330137 USH1GQ495M9 461 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 TMEM259Q4ZIN3 620 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 FOXB2Q5VYV0 432 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 CEP128Q6ZU80 1094 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 PIK3AP1Q6ZUJ8 805 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 NT5DC3Q86UY8 548 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 VPS36Q86VN1 386 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 RNF168Q8IYW5 571 aaPredicted RBP9.03□□□□□ -0.96
SKA2-201ENST00000330137 NME8Q8N427 588 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 PIP4K2CQ8TBX8 421 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 LRRC37BQ96QE4 947 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 AMFRQ9UKV5 643 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 PNMA3Q9UL41 463 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 V9GY48 417 aaPredicted RBP9.03□□□□□ -0.96
SKA2-201ENST00000330137 RPTORQ8N122 1335 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 CNTNAP5Q8WYK1 1306 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 SMIM31A0A1B0GVY4 71 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 ZWINTO95229 277 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 FGRP09769 529 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 FKBP3Q00688 224 aaKnown RBP9.03□□□□□ -0.96
SKA2-201ENST00000330137 ZDHHC24Q6UX98 284 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 VSIG1Q86XK7 387 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 ECHDC2Q86YB7 292 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 MYLK4Q86YV6 388 aaPredicted RBP9.03□□□□□ -0.96
SKA2-201ENST00000330137 RIBC1Q8N443 379 aaPredicted RBP9.03□□□□□ -0.96
SKA2-201ENST00000330137 WDR66Q8TBY9 1149 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 SLX1AQ9BQ83 275 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 AP1M1Q9BXS5 423 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 STX18Q9P2W9 335 aaKnown RBP9.03□□□□□ -0.96
SKA2-201ENST00000330137 LGALS13Q9UHV8 139 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 COL4A3BPQ9Y5P4 624 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 FLT1P17948 1338 aa9.03□□□□□ -0.96
SKA2-201ENST00000330137 TMEM120BA0PK00 339 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 ATP5J2-PTCD1G3V325 749 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 CETN3O15182 167 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 ATP9AO75110 1047 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 PTCD1O75127 700 aaKnown RBP9.02□□□□□ -0.96
SKA2-201ENST00000330137 PABPC4LP0CB38 370 aaKnown RBP9.02□□□□□ -0.96
SKA2-201ENST00000330137 RPL13P26373 211 aaKnown RBP9.02□□□□□ -0.96
SKA2-201ENST00000330137 ASIC1P78348 528 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 NR1H3Q13133 447 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 GIT2Q14161 759 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 RCN2Q14257 317 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 SLC4A8Q2Y0W8 1093 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 CNPY1Q3B7I2 92 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 DAAM2Q86T65 1068 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 KIAA0895Q8NCT3 520 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.02□□□□□ -0.96
SKA2-201ENST00000330137 CTNNBL1Q8WYA6 563 aaPredicted RBP9.02□□□□□ -0.96
SKA2-201ENST00000330137 TBC1D10AQ9BXI6 508 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 MTFR1LQ9H019 292 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 UBN1Q9NPG3 1134 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 PACSIN2Q9UNF0 486 aaPredicted RBP9.02□□□□□ -0.96
SKA2-201ENST00000330137 TNKSO95271 1327 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 ADGRA3Q8IWK6 1321 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 SLIT2O94813 1529 aa9.02□□□□□ -0.96
SKA2-201ENST00000330137 WNK3Q9BYP7 1800 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 GLI3P10071 1580 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 RIC1Q4ADV7 1423 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 PASKQ96RG2 1323 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 A0A1B0GVG6 124 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 TTLL1O95922 423 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 FAM200BP0CF97 657 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 IL9RQ01113 521 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 TROAPQ12815 778 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 LIN52Q52LA3 116 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 SLC45A4Q5BKX6 768 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 RASIP1Q5U651 963 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 SNX30Q5VWJ9 437 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 KLC3Q6P597 504 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 VSTM1Q6UX27 236 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 C4orf50Q6ZRC1 276 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 CABP7Q86V35 215 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 LONP2Q86WA8 852 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 BLIDQ8IZY5 108 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 TTC5Q8N0Z6 440 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 RSPH1Q8WYR4 309 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 SLC7A6OSQ96CW6 309 aaPredicted RBP9.02□□□□□ -0.97
SKA2-201ENST00000330137 RMDN2Q96LZ7 410 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 TGS1Q96RS0 853 aaKnown RBP9.02□□□□□ -0.97
SKA2-201ENST00000330137 ZSCAN10Q96SZ4 725 aaPredicted RBP9.02□□□□□ -0.97
SKA2-201ENST00000330137 ZNF184Q99676 751 aaPredicted RBP9.02□□□□□ -0.97
SKA2-201ENST00000330137 DDX23Q9BUQ8 820 aaKnown RBP9.02□□□□□ -0.97
SKA2-201ENST00000330137 TMEM60Q9H2L4 133 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 GOPCQ9HD26 462 aa9.02□□□□□ -0.97
SKA2-201ENST00000330137 PIH1D3Q9NQM4 214 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms