RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 TFR2Q9UP52 801 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 CTNND2Q9UQB3 1225 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 ARL2BPQ9Y2Y0 163 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 PCDHB6Q9Y5E3 794 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 PDS5AQ29RF7 1337 aaKnown RBP8.08□□□□□ -1.12
TRIM49-201ENST00000329758 WDR19Q8NEZ3 1342 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 TMEM110-MUSTN1A8MSY1 372 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 CES2O00748 559 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 P4HA2O15460 535 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 PJA2O43164 708 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 POTEJP0CG39 1038 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 GNAT2P19087 354 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 PTPREP23469 700 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 NEK2P51955 445 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 PDE1BQ01064 536 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 TRIM29Q14134 588 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 CFAP157Q5JU67 520 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 THOC7Q6I9Y2 204 aaKnown RBP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 PRR5LQ6MZQ0 368 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 TMEM53Q6P2H8 277 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 USP49Q70CQ1 688 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 CRACR2BQ8N4Y2 399 aaPredicted RBP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 MB21D1Q8N884 522 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 SH3RF3Q8TEJ3 882 aaPredicted RBP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 UBLCP1Q8WVY7 318 aaPredicted RBP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 CTNNBL1Q8WYA6 563 aaPredicted RBP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 FERMT2Q96AC1 680 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 PGM2Q96G03 612 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 TUBGCP5Q96RT8 1024 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 PPP1R12CQ9BZL4 782 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 NYXQ9GZU5 481 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 CNNM2Q9H8M5 875 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 INTS9Q9NV88 658 aaKnown RBP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 LRWD1Q9UFC0 647 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 FBXL5Q9UKA1 691 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 CHMP2BQ9UQN3 213 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 USP20Q9Y2K6 914 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 V9GY48 417 aaPredicted RBP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 SRCAPQ6ZRS2 3230 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 ANKRD31Q8N7Z5 1873 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 TNS1Q9HBL0 1735 aaKnown RBP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 SUPT3HO75486 399 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 LCA5LO95447 670 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 PORP16435 677 aaPredicted RBP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 VARSP26640 1264 aaKnown RBP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 CDK7P50613 346 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 MTTPP55157 894 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 SPIDRQ14159 915 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 SAFBQ15424 915 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 MAP7D1Q3KQU3 841 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 RNF43Q68DV7 783 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 UNC13DQ70J99 1090 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 SH3RF1Q7Z6J0 888 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 DZIP1Q86YF9 867 aaKnown RBP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 CCNJLQ8IV13 435 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 TBC1D16Q8TBP0 767 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 BHMTQ93088 406 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 UTP4Q969X6 686 aaKnown RBP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 ZSCAN10Q96SZ4 725 aaPredicted RBP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 KRT12Q99456 494 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 TLR10Q9BXR5 811 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 TTYH3Q9C0H2 523 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 EPB41L1Q9H4G0 881 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 EXOC1Q9NV70 894 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 MCM9Q9NXL9 1143 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 PTTG2Q9NZH5 202 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 EHD2Q9NZN4 543 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 AIPL1Q9NZN9 384 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 NDUFA13Q9P0J0 144 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 HSFX1Q9UBD0 423 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 FBXO2Q9UK22 296 aaPredicted RBP8.07□□□□□ -1.12
TRIM49-201ENST00000329758 EFR3BQ9Y2G0 817 aa8.07□□□□□ -1.12
TRIM49-201ENST00000329758 MYH6P13533 1939 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 A0A1W2PQJ5 194 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 CCDC162PA2VCL2 907 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 HTR3EA5X5Y0 456 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 RAD51CO43502 376 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 MOCS3O95396 460 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 MMP1P03956 469 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 PABPC4LP0CB38 370 aaKnown RBP8.06□□□□□ -1.12
TRIM49-201ENST00000329758 SLURP2P0DP57 97 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 IFNAR1P17181 557 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 CASP1P29466 404 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 ERVK-9P63128 1117 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 PAK1Q13153 545 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 ACVR2BQ13705 512 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 ITGA9Q13797 1035 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 FIGNQ5HY92 759 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 IFIT1BQ5T764 474 aaKnown RBP8.06□□□□□ -1.12
TRIM49-201ENST00000329758 MARK2Q7KZI7 788 aaKnown RBP8.06□□□□□ -1.12
TRIM49-201ENST00000329758 KRT27Q7Z3Y8 459 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 TMC3Q7Z5M5 1100 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 ZC3H18Q86VM9 953 aaKnown RBP8.06□□□□□ -1.12
TRIM49-201ENST00000329758 MAPKAPK5Q8IW41 473 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 DEPTORQ8TB45 409 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 MDM1Q8TC05 714 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 LRRC8CQ8TDW0 803 aa8.06□□□□□ -1.12
TRIM49-201ENST00000329758 DIS3LQ8TF46 1054 aaKnown RBP8.06□□□□□ -1.12
TRIM49-201ENST00000329758 NAT14Q8WUY8 206 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms