RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 PCBP1Q15365 356 aaKnown RBP eCLIP16.46■□□□□ 0.23
CLRN1-203ENST00000328863 HYIQ5T013 277 aa16.46■□□□□ 0.23
CLRN1-203ENST00000328863 FAM173BQ6P4H8 233 aa16.46■□□□□ 0.23
CLRN1-203ENST00000328863 CATSPER4Q7RTX7 472 aa16.46■□□□□ 0.23
CLRN1-203ENST00000328863 CABP7Q86V35 215 aa16.46■□□□□ 0.23
CLRN1-203ENST00000328863 SP7Q8TDD2 431 aaPredicted RBP16.46■□□□□ 0.23
CLRN1-203ENST00000328863 GUCD1Q96NT3 240 aa16.46■□□□□ 0.23
CLRN1-203ENST00000328863 USP28Q96RU2 1077 aa16.46■□□□□ 0.23
CLRN1-203ENST00000328863 GAS2L1Q99501 681 aaPredicted RBP16.46■□□□□ 0.23
CLRN1-203ENST00000328863 RGS18Q9NS28 235 aa16.46■□□□□ 0.23
CLRN1-203ENST00000328863 PIN4Q9Y237 131 aaKnown RBP16.46■□□□□ 0.23
CLRN1-203ENST00000328863 CLIC4Q9Y696 253 aa16.46■□□□□ 0.23
CLRN1-203ENST00000328863 MORC2Q9Y6X9 1032 aaPredicted RBP16.46■□□□□ 0.23
CLRN1-203ENST00000328863 MGEA5O60502 916 aa16.45■□□□□ 0.22
CLRN1-203ENST00000328863 SRGAP2CP0DJJ0 459 aa16.45■□□□□ 0.22
CLRN1-203ENST00000328863 FOSL2P15408 326 aa16.45■□□□□ 0.22
CLRN1-203ENST00000328863 IBSPP21815 317 aaPredicted RBP16.45■□□□□ 0.22
CLRN1-203ENST00000328863 CDC25AP30304 524 aa16.45■□□□□ 0.22
CLRN1-203ENST00000328863 ARL2P36404 184 aa16.45■□□□□ 0.22
CLRN1-203ENST00000328863 TAP1Q03518 808 aa16.45■□□□□ 0.22
CLRN1-203ENST00000328863 CAPSQ13938 189 aa16.45■□□□□ 0.22
CLRN1-203ENST00000328863 PPP2R5AQ15172 486 aa16.45■□□□□ 0.22
CLRN1-203ENST00000328863 PTPAQ15257 358 aa16.45■□□□□ 0.22
CLRN1-203ENST00000328863 ECM1Q16610 540 aa16.45■□□□□ 0.22
CLRN1-203ENST00000328863 FAM102BQ5T8I3 360 aa16.45■□□□□ 0.22
CLRN1-203ENST00000328863 SLC24A5Q71RS6 500 aa16.45■□□□□ 0.22
CLRN1-203ENST00000328863 SAMD11Q96NU1 681 aa16.45■□□□□ 0.22
CLRN1-203ENST00000328863 MMTAG2Q9BU76 263 aaKnown RBP16.45■□□□□ 0.22
CLRN1-203ENST00000328863 IFT122Q9HBG6 1241 aa16.45■□□□□ 0.22
CLRN1-203ENST00000328863 AGPAT5Q9NUQ2 364 aa16.45■□□□□ 0.22
CLRN1-203ENST00000328863 A0A087WWV3 80 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 LINC01553A4QN01 128 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 LRRIQ4A6NIV6 560 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 RBAK-RBAKDNI3L0D1 243 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 HOXA2O43364 376 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 CYP11B2P19099 503 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 FGFR4P22455 802 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 GLRA2P23416 452 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 NASPP49321 788 aaPredicted RBP16.44■□□□□ 0.22
CLRN1-203ENST00000328863 CEBPZQ03701 1054 aaKnown RBP16.44■□□□□ 0.22
CLRN1-203ENST00000328863 POU5F1BQ06416 359 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 DSC3Q14574 896 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 STK38Q15208 465 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 MAEAQ7L5Y9 396 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 IFNLR1Q8IU57 520 aaPredicted RBP16.44■□□□□ 0.22
CLRN1-203ENST00000328863 ZBTB8OSQ8IWT0 167 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 ASAP3Q8TDY4 903 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 KIFAP3Q92845 792 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 TGS1Q96RS0 853 aaKnown RBP16.44■□□□□ 0.22
CLRN1-203ENST00000328863 CDX2Q99626 313 aaPredicted RBP16.44■□□□□ 0.22
CLRN1-203ENST00000328863 NFKBIZQ9BYH8 718 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 ELAC1Q9H777 363 aaKnown RBP16.44■□□□□ 0.22
CLRN1-203ENST00000328863 RC3H2Q9HBD1 1191 aaKnown RBP16.44■□□□□ 0.22
CLRN1-203ENST00000328863 GPRC5CQ9NQ84 441 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 CHST12Q9NRB3 414 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 STXBP5LQ9Y2K9 1186 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 RWDD3Q9Y3V2 267 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 PCDHB7Q9Y5E2 793 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 MYO9BQ13459 2157 aa16.44■□□□□ 0.22
CLRN1-203ENST00000328863 C9IYK1 514 aa16.43■□□□□ 0.22
CLRN1-203ENST00000328863 E9PMD0 336 aa16.43■□□□□ 0.22
CLRN1-203ENST00000328863 INO80B-WBP1J3KQ70 363 aa16.43■□□□□ 0.22
CLRN1-203ENST00000328863 SKIP12755 728 aa16.43■□□□□ 0.22
CLRN1-203ENST00000328863 MARCKSP29966 332 aaPredicted RBP16.43■□□□□ 0.22
CLRN1-203ENST00000328863 RAB27AP51159 221 aa16.43■□□□□ 0.22
CLRN1-203ENST00000328863 PTENP60484 403 aa16.43■□□□□ 0.22
CLRN1-203ENST00000328863 GRIN2CQ14957 1233 aa16.43■□□□□ 0.22
CLRN1-203ENST00000328863 TMEM119Q4V9L6 283 aa16.43■□□□□ 0.22
CLRN1-203ENST00000328863 FOXD4L5Q5VV16 416 aaPredicted RBP16.43■□□□□ 0.22
CLRN1-203ENST00000328863 TWF2Q6IBS0 349 aaKnown RBP16.43■□□□□ 0.22
CLRN1-203ENST00000328863 CMTR2Q8IYT2 770 aaKnown RBP16.43■□□□□ 0.22
CLRN1-203ENST00000328863 FOXD4L4Q8WXT5 416 aaPredicted RBP16.43■□□□□ 0.22
CLRN1-203ENST00000328863 MYLIPQ8WY64 445 aa16.43■□□□□ 0.22
CLRN1-203ENST00000328863 ARNTL2Q8WYA1 636 aa16.43■□□□□ 0.22
CLRN1-203ENST00000328863 IFT74Q96LB3 600 aa16.43■□□□□ 0.22
CLRN1-203ENST00000328863 TIPINQ9BVW5 301 aa16.43■□□□□ 0.22
CLRN1-203ENST00000328863 C2orf40Q9H1Z8 148 aa16.43■□□□□ 0.22
CLRN1-203ENST00000328863 TMEM161AQ9NX61 479 aa16.43■□□□□ 0.22
CLRN1-203ENST00000328863 FBXO2Q9UK22 296 aaPredicted RBP16.43■□□□□ 0.22
CLRN1-203ENST00000328863 CSDE1O75534 798 aaKnown RBP16.42■□□□□ 0.22
CLRN1-203ENST00000328863 DGKIO75912 1065 aa16.42■□□□□ 0.22
CLRN1-203ENST00000328863 ARHGEF15O94989 841 aa16.42■□□□□ 0.22
CLRN1-203ENST00000328863 YEATS4O95619 227 aa16.42■□□□□ 0.22
CLRN1-203ENST00000328863 SSBP05455 408 aaKnown RBP eCLIP16.42■□□□□ 0.22
CLRN1-203ENST00000328863 NAMPTP43490 491 aa16.42■□□□□ 0.22
CLRN1-203ENST00000328863 NCBP1Q09161 790 aaKnown RBP16.42■□□□□ 0.22
CLRN1-203ENST00000328863 GRB10Q13322 594 aa16.42■□□□□ 0.22
CLRN1-203ENST00000328863 BTG3Q14201 252 aaPredicted RBP16.42■□□□□ 0.22
CLRN1-203ENST00000328863 RTN4RL1Q86UN2 441 aaPredicted RBP16.42■□□□□ 0.22
CLRN1-203ENST00000328863 ABI1Q8IZP0 508 aa16.42■□□□□ 0.22
CLRN1-203ENST00000328863 FIBCD1Q8N539 461 aa16.42■□□□□ 0.22
CLRN1-203ENST00000328863 KRI1Q8N9T8 703 aaKnown RBP16.42■□□□□ 0.22
CLRN1-203ENST00000328863 DEPTORQ8TB45 409 aa16.42■□□□□ 0.22
CLRN1-203ENST00000328863 CCDC51Q96ER9 411 aa16.42■□□□□ 0.22
CLRN1-203ENST00000328863 DRC1Q96MC2 740 aa16.42■□□□□ 0.22
CLRN1-203ENST00000328863 PNMA5Q96PV4 448 aa16.42■□□□□ 0.22
CLRN1-203ENST00000328863 PRDM12Q9H4Q4 367 aa16.42■□□□□ 0.22
CLRN1-203ENST00000328863 KCND2Q9NZV8 630 aa16.42■□□□□ 0.22
CLRN1-203ENST00000328863 CCDC39Q9UFE4 941 aa16.42■□□□□ 0.22
CLRN1-203ENST00000328863 SRPRBQ9Y5M8 271 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms