RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 LBRQ14739 615 aaKnown RBP13.8□□□□□ -0.2
CCDC60-201ENST00000327554 EXOC3L4Q17RC7 722 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 SGSM1Q2NKQ1 1148 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 PARP6Q2NL67 630 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 ZNF568Q3ZCX4 644 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 OTUD6AQ7L8S5 288 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 VPS36Q86VN1 386 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 ECHDC2Q86YB7 292 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 GALNT15Q8N3T1 639 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 SLC30A5Q8TAD4 765 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 TEKT4Q8WW24 435 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 ALG3Q92685 438 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 SLC4A9Q96Q91 983 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 SPZ1Q9BXG8 430 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 ETNK1Q9HBU6 452 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 MTRF1LQ9UGC7 380 aaKnown RBP13.8□□□□□ -0.2
CCDC60-201ENST00000327554 PFASO15067 1338 aa13.8□□□□□ -0.2
CCDC60-201ENST00000327554 TAF1P21675 1872 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 KLRF2D3W0D1 207 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 PHF2O75151 1096 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 TPBGLP0DKB5 382 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 MYBL1P10243 752 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 IL2RBP14784 551 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 GM2AP17900 193 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 EPHA7Q15375 998 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 EDRF1Q3B7T1 1238 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 CCDC152Q4G0S7 254 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 AADACL2Q6P093 401 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 APLFQ8IW19 511 aaPredicted RBP13.79□□□□□ -0.2
CCDC60-201ENST00000327554 REXO1Q8N1G1 1221 aaKnown RBP13.79□□□□□ -0.2
CCDC60-201ENST00000327554 FBF1Q8TES7 1133 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 STK32AQ8WU08 396 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 ZFAND2BQ8WV99 257 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 RFFLQ8WZ73 363 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 ARHGEF2Q92974 986 aaKnown RBP13.79□□□□□ -0.2
CCDC60-201ENST00000327554 ROPN1BQ9BZX4 212 aaPredicted RBP13.79□□□□□ -0.2
CCDC60-201ENST00000327554 ROPN1Q9HAT0 212 aaPredicted RBP13.79□□□□□ -0.2
CCDC60-201ENST00000327554 MLXIPLQ9NP71 852 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 CYP39A1Q9NYL5 469 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 HGSO14964 777 aaPredicted RBP13.79□□□□□ -0.2
CCDC60-201ENST00000327554 CETN3O15182 167 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 GH1P01241 217 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 AFPP02771 609 aaKnown RBP13.79□□□□□ -0.2
CCDC60-201ENST00000327554 KRT13P13646 458 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 RAD23BP54727 409 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 MPP2Q14168 576 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 LONRF1Q17RB8 773 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 TTC27Q6P3X3 843 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 LMNTD2Q8IXW0 634 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 PRELID2Q8N945 189 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 TMEM47Q9BQJ4 181 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 LZTS2Q9BRK4 669 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 RAB34Q9BZG1 259 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 EMILIN3Q9NT22 766 aa13.79□□□□□ -0.2
CCDC60-201ENST00000327554 MAST2Q6P0Q8 1798 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 PDHA1P08559 390 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 ALAS1P13196 640 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 NR2F2P24468 414 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 PEX5P50542 639 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 PDCD2Q16342 344 aaPredicted RBP13.78□□□□□ -0.2
CCDC60-201ENST00000327554 GJB7Q6PEY0 223 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 MTHFD1LQ6UB35 978 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 ZDHHC14Q8IZN3 488 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 PIGOQ8TEQ8 1089 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 DYNLL2Q96FJ2 89 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 LRMDAQ9H2I8 198 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 MCM9Q9NXL9 1143 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 PARP2Q9UGN5 583 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 PCYOX1Q9UHG3 505 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 NPHP3-ACAD11A0A0J9YXS1 232 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 ANKRD63C9JTQ0 380 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 TMEM253P0C7T8 217 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 CNGA1P29973 690 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 CHRNA3P32297 505 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 PCK1P35558 622 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 CACNB1Q02641 598 aaPredicted RBP13.78□□□□□ -0.2
CCDC60-201ENST00000327554 RNASELQ05823 741 aaKnown RBP13.78□□□□□ -0.2
CCDC60-201ENST00000327554 ACVR2BQ13705 512 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 SOGA3Q5TF21 947 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 PPP4R3CPQ6ZMV5 832 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 FRMD5Q7Z6J6 570 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 ENDOVQ8N8Q3 282 aaKnown RBP13.78□□□□□ -0.2
CCDC60-201ENST00000327554 ANKRD42Q8N9B4 389 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 GDAP1Q8TB36 358 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 ASAP3Q8TDY4 903 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 KLHL14Q9P2G3 628 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 ARMCX3Q9UH62 379 aaPredicted RBP13.78□□□□□ -0.2
CCDC60-201ENST00000327554 C2CD2Q9Y426 696 aa13.78□□□□□ -0.2
CCDC60-201ENST00000327554 FOXO6A8MYZ6 492 aa13.77□□□□□ -0.21
CCDC60-201ENST00000327554 PLCG2P16885 1265 aa13.77□□□□□ -0.21
CCDC60-201ENST00000327554 MKRN3Q13064 507 aaKnown RBP13.77□□□□□ -0.21
CCDC60-201ENST00000327554 PPP1R15BQ5SWA1 713 aa13.77□□□□□ -0.21
CCDC60-201ENST00000327554 C12orf60Q5U649 245 aa13.77□□□□□ -0.21
CCDC60-201ENST00000327554 CCDC65Q8IXS2 484 aa13.77□□□□□ -0.21
CCDC60-201ENST00000327554 FAM13CQ8NE31 585 aa13.77□□□□□ -0.21
CCDC60-201ENST00000327554 ART4Q93070 314 aa13.77□□□□□ -0.21
CCDC60-201ENST00000327554 ARHGEF26Q96DR7 871 aa13.77□□□□□ -0.21
CCDC60-201ENST00000327554 TGS1Q96RS0 853 aaKnown RBP13.77□□□□□ -0.21
CCDC60-201ENST00000327554 DDX23Q9BUQ8 820 aaKnown RBP13.77□□□□□ -0.21
CCDC60-201ENST00000327554 TXLNGQ9NUQ3 528 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms