RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 HSPA6P17066 643 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 GAP43P17677 238 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 CYP3A7P24462 503 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 MMP13P45452 471 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 SLCO1A2P46721 670 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 CLNS1AP54105 237 aaKnown RBP15.79■□□□□ 0.12
SSBP3-201ENST00000326956 KCNA1Q09470 495 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 IKQ13123 557 aaPredicted RBP15.79■□□□□ 0.12
SSBP3-201ENST00000326956 AP3B2Q13367 1082 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 ITIH4Q14624 930 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 FAM133BQ5BKY9 247 aaKnown RBP15.79■□□□□ 0.12
SSBP3-201ENST00000326956 C15orf52Q6ZUT6 534 aaKnown RBP15.79■□□□□ 0.12
SSBP3-201ENST00000326956 PRMT1Q99873 361 aaKnown RBP15.79■□□□□ 0.12
SSBP3-201ENST00000326956 ERVK-5Q9HDB9 667 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 ZDHHC18Q9NUE0 388 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 SYNGAP1Q96PV0 1343 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 A0A1B0GUA9 196 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 ANKRD62A6NC57 917 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 C6orf229H3BNL8 230 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 HLA-DOAP06340 250 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 FMO5P49326 533 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 ELF3P78545 371 aaPredicted RBP15.79■□□□□ 0.12
SSBP3-201ENST00000326956 PPATQ06203 517 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 SEL1L2Q5TEA6 688 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 DCAF12L1Q5VU92 463 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 SLC30A5Q8TAD4 765 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 TXLNGYQ9BZA5 131 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 THAP2Q9H0W7 228 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 CEP83Q9Y592 693 aa15.79■□□□□ 0.12
SSBP3-201ENST00000326956 IGKV6D-41A0A0C4DH26 115 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 PODXLO00592 558 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 GAKO14976 1311 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 MGRN1O60291 552 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 GSTA1P08263 222 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 CHRNA3P32297 505 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 GABPAQ06546 454 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 BMT2Q1RMZ1 405 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 MOXD1Q6UVY6 613 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 FAM228AQ86W67 206 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 CCDC25Q86WR0 208 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 RHOT2Q8IXI1 618 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 RNF25Q96BH1 459 aaPredicted RBP15.78■□□□□ 0.12
SSBP3-201ENST00000326956 ARHGEF26Q96DR7 871 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 ZNF317Q96PQ6 595 aaPredicted RBP15.78■□□□□ 0.12
SSBP3-201ENST00000326956 NOD2Q9HC29 1040 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 TRPC6Q9Y210 931 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 IGSF9BQ9UPX0 1349 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 RASGRF2O14827 1237 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 KIAA0391O15091 583 aaKnown RBP15.78■□□□□ 0.12
SSBP3-201ENST00000326956 TBX3O15119 743 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 PPIP5K2O43314 1243 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 PHF2O75151 1096 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 ATP6V1G2O95670 118 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 SPATA31C1P0DKV0 1188 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 IL1R1P14778 569 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 CYP2J2P51589 502 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 DRG2P55039 364 aaKnown RBP15.78■□□□□ 0.12
SSBP3-201ENST00000326956 IFI35P80217 286 aaPredicted RBP15.78■□□□□ 0.12
SSBP3-201ENST00000326956 KLRC3Q07444 240 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 RC3H1Q5TC82 1133 aaKnown RBP15.78■□□□□ 0.12
SSBP3-201ENST00000326956 TBC1D1Q86TI0 1168 aaPredicted RBP15.78■□□□□ 0.12
SSBP3-201ENST00000326956 COL23A1Q86Y22 540 aaPredicted RBP15.78■□□□□ 0.12
SSBP3-201ENST00000326956 RUSC1Q9BVN2 902 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 MIF4GDA9UHW6 222 aaKnown RBP15.78■□□□□ 0.12
SSBP3-201ENST00000326956 GTF2IP78347 998 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 SLMAPQ14BN4 828 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 STXBP4Q6ZWJ1 553 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 TRPM8Q7Z2W7 1104 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 CCDC105Q8IYK2 499 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 C18orf8Q96DM3 657 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 RSRC1Q96IZ7 334 aaKnown RBP15.78■□□□□ 0.12
SSBP3-201ENST00000326956 SEMA4AQ9H3S1 761 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 ALG6Q9Y672 507 aa15.78■□□□□ 0.12
SSBP3-201ENST00000326956 RPSAP08865 295 aaKnown RBP15.77■□□□□ 0.12
SSBP3-201ENST00000326956 MAP2K1Q02750 393 aaPredicted RBP15.77■□□□□ 0.12
SSBP3-201ENST00000326956 ETNPPLQ8TBG4 499 aa15.77■□□□□ 0.12
SSBP3-201ENST00000326956 ARHGEF1Q92888 912 aaKnown RBP15.77■□□□□ 0.12
SSBP3-201ENST00000326956 FAM20AQ96MK3 541 aa15.77■□□□□ 0.12
SSBP3-201ENST00000326956 INTS2Q9H0H0 1204 aaKnown RBP15.77■□□□□ 0.12
SSBP3-201ENST00000326956 HOMER3Q9NSC5 361 aa15.77■□□□□ 0.12
SSBP3-201ENST00000326956 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.77■□□□□ 0.123e-6■■■□□ 16.7
SSBP3-201ENST00000326956 CNOT7Q9UIV1 285 aaKnown RBP15.77■□□□□ 0.12
SSBP3-201ENST00000326956 MTUS1Q9ULD2 1270 aa15.77■□□□□ 0.12
SSBP3-201ENST00000326956 MYO3BQ8WXR4 1341 aa15.77■□□□□ 0.11
SSBP3-201ENST00000326956 LRRN2O75325 713 aa15.77■□□□□ 0.11
SSBP3-201ENST00000326956 EYA4O95677 639 aa15.77■□□□□ 0.11
SSBP3-201ENST00000326956 NMT1P30419 496 aaKnown RBP15.77■□□□□ 0.11
SSBP3-201ENST00000326956 ATXN2LQ8WWM7 1075 aaKnown RBP15.77■□□□□ 0.11
SSBP3-201ENST00000326956 ALG3Q92685 438 aa15.77■□□□□ 0.11
SSBP3-201ENST00000326956 ATP6V0A4Q9HBG4 840 aa15.77■□□□□ 0.11
SSBP3-201ENST00000326956 APEX2Q9UBZ4 518 aa15.77■□□□□ 0.11
SSBP3-201ENST00000326956 CD2APQ9Y5K6 639 aa15.77■□□□□ 0.11
SSBP3-201ENST00000326956 CFAP73A6NFT4 308 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 BCRP11274 1271 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 FGFR4P22455 802 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 PDE6CP51160 858 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 MYL7Q01449 175 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 SPIRE1Q08AE8 756 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 PIGWQ7Z7B1 504 aa15.76■□□□□ 0.11
SSBP3-201ENST00000326956 PIGOQ8TEQ8 1089 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms