RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 NFATC2IPQ8NCF5 419 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 SCYL1Q96KG9 808 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 ADD3Q9UEY8 706 aaKnown RBP7.52□□□□□ -1.21
SMC1A-201ENST00000322213 ARHGAP26Q9UNA1 814 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 ICE1Q9Y2F5 2266 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 MED12Q93074 2177 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 ZNF839A8K0R7 811 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 PDE5AO76074 875 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 LDHBP07195 334 aaKnown RBP7.52□□□□□ -1.21
SMC1A-201ENST00000322213 BRAFP15056 766 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 ITGA6P23229 1130 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 KRR1Q13601 381 aaKnown RBP7.52□□□□□ -1.21
SMC1A-201ENST00000322213 RNF207Q6ZRF8 634 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 DEPDC1BQ8WUY9 529 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 PCDHB6Q9Y5E3 794 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 LRRN2O75325 713 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 KRT4P19013 534 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 USP33Q8TEY7 942 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 IFNAR1P17181 557 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 NR5A1Q13285 461 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 DPH6Q7L8W6 267 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 CMTM5Q96DZ9 223 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 CNGB3Q9NQW8 809 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 BTBD7Q9P203 1132 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 PCDH11XQ9BZA7 1347 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 GTF3C1Q12789 2109 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 SMCO2A6NFE2 343 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 FESP07332 822 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 PSMC2P35998 433 aaKnown RBP7.52□□□□□ -1.21
SMC1A-201ENST00000322213 TRIM16LQ309B1 348 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 PIGOQ8TEQ8 1089 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 ZNF184Q99676 751 aaPredicted RBP7.52□□□□□ -1.21
SMC1A-201ENST00000322213 MRGBPQ9NV56 204 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 MTO1Q9Y2Z2 717 aaKnown RBP7.52□□□□□ -1.21
SMC1A-201ENST00000322213 SRRM3A6NNA2 597 aaPredicted RBP7.52□□□□□ -1.21
SMC1A-201ENST00000322213 GFPT2O94808 682 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 GAP43P17677 238 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 PDE1BQ01064 536 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 FAM26FQ5R3K3 315 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 FOXR1Q6PIV2 292 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 FAM178BQ8IXR5 827 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 LPIN2Q92539 896 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 RAPGEF5Q92565 580 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 EYA1Q99502 592 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 TIMMDC1Q9NPL8 285 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 KDM3BQ7LBC6 1761 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 MAST3O60307 1309 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 ZBBXA8MT70 800 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 PTPREP23469 700 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 ECE1P42892 770 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 HADHQ16836 314 aaKnown RBP7.52□□□□□ -1.21
SMC1A-201ENST00000322213 CMTR1Q8N1G2 835 aaKnown RBP7.52□□□□□ -1.21
SMC1A-201ENST00000322213 MRPL47Q9HD33 250 aaKnown RBP7.52□□□□□ -1.21
SMC1A-201ENST00000322213 UBR2Q8IWV8 1755 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 TIAM2Q8IVF5 1701 aa7.52□□□□□ -1.21
SMC1A-201ENST00000322213 COPEO14579 308 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 UBTFL6P0CB48 400 aaPredicted RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 NLRP11P59045 1033 aaKnown RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 ALKBH5Q6P6C2 394 aaKnown RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 ARL10Q8N8L6 244 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 DDHD1Q8NEL9 900 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 ALKBH8Q96BT7 664 aaKnown RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 TSSK1BQ9BXA7 367 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 IRX2Q9BZI1 471 aaPredicted RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 TMEM120BA0PK00 339 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 KRT8P05787 483 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 SLC1A4P43007 532 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 GCLCP48506 637 aaPredicted RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 SEC24CP53992 1094 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 ARL4CP56559 192 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 GRIN1Q05586 938 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 CDC37Q16543 378 aaPredicted RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 SLC26A7Q8TE54 656 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 ROPN1BQ9BZX4 212 aaPredicted RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 ROPN1Q9HAT0 212 aaPredicted RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 COPRSQ9NQ92 184 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 PDS5AQ29RF7 1337 aaKnown RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 DAPK3O43293 454 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 ATP6V1G1O75348 118 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 TRIM65Q6PJ69 517 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 SUCLA2Q9P2R7 463 aaPredicted RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 TNKSO95271 1327 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 CEP170BQ9Y4F5 1589 aaPredicted RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 RAPGEF3O95398 923 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 KPNA2P52292 529 aaKnown RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 PPP2R5CQ13362 524 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 STAT4Q14765 748 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 ACAD11Q709F0 780 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 IFNL3Q8IZI9 196 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 PNMA2Q9UL42 364 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 KIAA0100Q14667 2235 aaKnown RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 OVOS2A0A0G2JMS6 1433 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 A8MXQ7 604 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 FAM200BP0CF97 657 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 P4HA1P13674 534 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 PDE6AP16499 860 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 ARFIP2P53365 341 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 PDXDC1Q6P996 788 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 DCAF5Q96JK2 942 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 CSRNP1Q96S65 589 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms